Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

ingest exaspim spreadsheets #337

Open
wants to merge 46 commits into
base: main
Choose a base branch
from
Open

ingest exaspim spreadsheets #337

wants to merge 46 commits into from

Conversation

Sun-flow
Copy link
Contributor

@Sun-flow Sun-flow commented May 1, 2024

closes #334
closes unmigrated issue #86 in aind-data-migration-scripts.

This script parses through 3 files from the exaspim team to add SpecimenProcedures for a number of subjects, as well as update their existing SubjectProcedures with their injection materials and correct protocol id (if there is one).

Most of this information was sourced via Naveen Ouellette.

@Sun-flow Sun-flow requested review from dyf and saskiad May 1, 2024 16:59
@Sun-flow Sun-flow self-assigned this May 1, 2024
@mekhlakapoor
Copy link
Contributor

@Sun-flow @dyf @saskiad @jtyoung84 Is this branch still being worked on? There shouldnt be this many files?

@jtyoung84
Copy link
Collaborator

@Sun-flow @dyf @saskiad @jtyoung84 Is this branch still being worked on? There shouldnt be this many files?

This repo is being sunsetted. I'll close out the PRs when I archive it.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

update exaspim ingest subj procedures with inj materials
3 participants