General: - [x] ~Container updates (https://github.com/BD2KGenomics/cgl-docker-lib/pull/241)~ triaging to #100 Spark: - [x] Spark should have the ability to chose the container to run - [x] Spark should allow docker-in-docker New tools: - [x] Pull in avocado - [x] Pull in cannoli Split this into a new ticket #97.
General:
Container updates (ADAM recompute updates (resolves #201) cgl-docker-lib#241)triaging to Make docker image parametrizable for all tools #100Spark:
New tools:
Split this into a new ticket #97.