Skip to content

Latest commit

 

History

History
executable file
·
10 lines (7 loc) · 380 Bytes

README.md

File metadata and controls

executable file
·
10 lines (7 loc) · 380 Bytes

Prerequisites

Make sure nextflow, conda and singularity (or docker) are in the PATH.

Quick start (lsf)

  1. git pull this repo
  2. Go to interactive session (you will need access to imaging queue): bsub -q imaging -n1 -M6000 -R"select[mem>6000] rusage[mem=6000]" -Is $SHELL
  3. Run bash lsf.sh [path-to-yaml-config], in a folder where you have write permission