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OtabekRintaroOtabekRintaro
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Create workflow for MacOS package deployment
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‎.github/workflows/deploy.yml‎

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name: MAN deploy-docker
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on:
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# release:
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# types:
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# - published
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workflow_dispatch:
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release:
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types:
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- published
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jobs:
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deploy-gpu:
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runs-on: ubuntu-latest
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timeout-minutes: 120
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steps:
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- name: Checkout repository
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uses: actions/checkout@v3
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with:
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fetch-depth: 0
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- name: Login to Docker
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uses: docker/login-action@v2
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with:
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username: ${{ secrets.DOCKERHUB_USERNAME }}
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password: ${{ secrets.DOCKERHUB_TOKEN }}
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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- name: Build Docker image GPU
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run: python Docker/build.py --device cuda --tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }}
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- name: Add additional tags
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run: |
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docker tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }} ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-latest
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docker tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }} ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:latest
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- name: Push Docker image GPU
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run: docker push --all-tags ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }}
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deploy-cpu:
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runs-on: ubuntu-latest
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deploy-mac:
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runs-on: macos-14
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timeout-minutes: 120
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env:
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ARTIFACT_NAME: FastSurfer
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VERSION: 242
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FREESURFER_URL: https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.4.1/freesurfer-macOS-darwin_x86_64-7.4.1.tar.gz
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UPLOAD_ARTIFACT: true
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steps:
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- name: Get repository name.
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run: echo "FASTSURFER_DIR=$GITHUB_WORKSPACE" >> $GITHUB_ENV
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- name: Checkout repository
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uses: actions/checkout@v3
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with:
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fetch-depth: 0
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- name: Login to Docker
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uses: docker/login-action@v2
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- name: Set up python environment
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uses: actions/setup-python@v6
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with:
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username: ${{ secrets.DOCKERHUB_USERNAME }}
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password: ${{ secrets.DOCKERHUB_TOKEN }}
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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- name: Build Docker image CPU
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run: python Docker/build.py --device cpu --tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-${{ github.event.release.tag_name }}
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- name: Add additional tags
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python-version: '3.10'
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- name: install dependencies
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run: |
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docker tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-${{ github.event.release.tag_name }} ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-latest
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- name: Push Docker image CPU
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run: docker push --all-tags ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-${{ github.event.release.tag_name }}
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python -m pip install py2app
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brew update
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brew upgrade || true
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brew install xmlstarlet
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- name: package app for arm
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run: tools/macos_build/build_release_package.sh ${{ env.VERSION }} arm ${{ env.FASTSURFER_DIR }} ${{ env.FREESURFER_URL }}
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- name: package app for intel
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run: tools/macos_build/build_release_package.sh ${{ env.VERSION }} intel ${{ env.FASTSURFER_DIR }} ${{ env.FREESURFER_URL }}
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- name: Move artifact.
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if: env.UPLOAD_ARTIFACT == 'true'
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run: |
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mkdir artifact
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mv tools/macos_build/installer/* artifact/
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- uses: actions/upload-artifact@v4
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if: env.UPLOAD_ARTIFACT == 'true'
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name: Upload artifact.
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with:
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name: ${{ env.ARTIFACT_NAME }}
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path: ${{ env.FASTSURFER_DIR }}/artifact/
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# deploy-gpu:
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# runs-on: ubuntu-latest
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# timeout-minutes: 120
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# steps:
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# - name: Checkout repository
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# uses: actions/checkout@v3
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# with:
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# fetch-depth: 0
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# - name: Login to Docker
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# uses: docker/login-action@v2
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# with:
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# username: ${{ secrets.DOCKERHUB_USERNAME }}
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# password: ${{ secrets.DOCKERHUB_TOKEN }}
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# - name: Set up Docker Buildx
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# uses: docker/setup-buildx-action@v2
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# - name: Build Docker image GPU
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# run: python Docker/build.py --device cuda --tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }}
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# - name: Add additional tags
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# run: |
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# docker tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }} ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-latest
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# docker tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }} ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:latest
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# - name: Push Docker image GPU
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# run: docker push --all-tags ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:gpu-${{ github.event.release.tag_name }}
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# deploy-cpu:
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# runs-on: ubuntu-latest
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# timeout-minutes: 120
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# steps:
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# - name: Checkout repository
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# uses: actions/checkout@v3
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# with:
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# fetch-depth: 0
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# - name: Login to Docker
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# uses: docker/login-action@v2
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# with:
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# username: ${{ secrets.DOCKERHUB_USERNAME }}
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# password: ${{ secrets.DOCKERHUB_TOKEN }}
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# - name: Set up Docker Buildx
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# uses: docker/setup-buildx-action@v2
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# - name: Build Docker image CPU
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# run: python Docker/build.py --device cpu --tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-${{ github.event.release.tag_name }}
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# - name: Add additional tags
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# run: |
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# docker tag ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-${{ github.event.release.tag_name }} ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-latest
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# - name: Push Docker image CPU
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# run: docker push --all-tags ${{ secrets.DOCKERHUB_USERNAME }}/fastsurfer:cpu-${{ github.event.release.tag_name }}

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