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ibeausolibeausol
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Adding files that were neglected from the commit on 2016-07-25.
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16 files changed

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‎src/GPL.txt‎

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‎src/bin/download_and_install_ESP-r.bash‎

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#!/bin/bash
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#-----------------------------------------------------------
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# Detect architecture. In the case of OSX force it to x86_64
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# otherwise let uname -m do it.
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#-----------------------------------------------------------
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architecture=`uname -s` # computer type e.g. Linux Darwin SunOS
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if [ "$architecture" = "Darwin" ]; then
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machine="x86_64"
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else
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machine=`uname -m` # CPU e.g. i386 x86_64 sun4u
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fi
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platform="auto-detect" # default platform
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#-----------------------------------------------------------
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# If auto-detection is active, interpret architecture
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#-----------------------------------------------------------
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if [ "$platform" = "auto-detect" ]; then
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# Add more architectures here as they become available.
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# Note: $architecture has been error-trapped above.
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case $architecture in
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Linux) platform="linux";;
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CYGWIN_NT-5.2 | CYGWIN_NT-5.1 | CYGWIN_NT-5.0 | CYGWIN_NT-6.0 | CYGWIN_NT-6.1 | CYGWIN_NT-6.1-WOW64 | CYGWIN_NT-10.0) platform="cygwin";;
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MINGW64_NT-10.0 |MINGW64_NT-6.1 |MINGW32_NT-6.1 | MINGW32_NT-5.2 | MINGW32_NT-5.1 | MSYS_NT-6.1 ) platform="mingw";;
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Darwin) platform="mac";;
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esac
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fi
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echo " ";
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echo "This script grabs the cutting-edge ESP-r repositories from Github, assembles";
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echo "them for compiling and then, optionally, invokes the ESP-r Install script";
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echo "to build ESP-r, its databases, exemplar models and places the distribution";
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if [ "$platform" = "linux" ] ||
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[ "$platform" = "cygwin" ] ; then
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echo "in a standard location on Linux based computers (/opt/esru).";
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fi
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if [ "$platform" = "mac" ] ; then
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echo "in a standard location on OSX based computers (/opt/esru).";
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fi
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if [ "$platform" = "mingw" ] ; then
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echo "in a standard location on Windows 7/10 computers (C:/ESRU).";
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echo "when building within MSYS2 command window.";
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fi
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echo " ";
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echo "The script will create esru and an esru/tmp folders within the folder";
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echo "where it is currently located. The assembled sources will be found in";
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echo "a folder ESP-rMaster and the ESP-r distribution (executables, databases,";
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echo "exemplars, and documentation) will be placed in /opt/esru and links";
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if [ "$platform" = "linux" ] ||
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[ "$platform" = "cygwin" ] ; then
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echo "to ESP-r executables will be placed in /usr/bin so that";
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echo "they will be easily found by the operating system.";
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fi
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if [ "$platform" = "mac" ] ; then
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echo "to ESP-r executables will be placed in $HOME/bin so that";
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echo "they will be easily found by the operating system.";
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fi
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if [ "$platform" = "mingw" ] ; then
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echo "The $PATH environment variable will be updated.";
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fi
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echo " ";
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echo "The script begins by checking for dependencies (e.g. gcc g++ gfortran";
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echo "compilers and a git client). If they are not found you will need to";
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echo "install these. You also need to have root permissions to run the script";
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echo "(use sudo).";
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echo " ";
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echo "The script will replace any existing ESP-r distribution so backup or";
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echo "move anything in /opt/esru before you proceed. It will use typical";
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echo "assumptions when invoking the ESP-r Install script (you have the";
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echo "option to run Install manually). ";
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echo " ";
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echo "Proceed with these tasks?";
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YN=none;
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while [ "$YN" != "y" ] && [ "$YN" != "n" ] && [ "$YN" != "" ]
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do
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if [ "$YN" != "none" ]; then
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echo " ";
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echo "Please answer yes or no (y/n) [y].";
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fi
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read YN
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done
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if [ "$YN" = "n" ]; then
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# tell user to run Install manually.
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echo "Exiting the script.";
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exit;
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fi
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if [ "$platform" = "linux" ] ||
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[ "$platform" = "mac" ] ; then
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echo "Step 0 Are you root?";
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if [[ $EUID -ne 0 ]]; then
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echo "This script must be run as root, use sudo ./download_and_install_ESP-r.bash";
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echo "... aborting";
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exit;
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fi
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echo "Step 0 Are you root? ... DONE";
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fi
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echo " ";
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echo "Step 1 Check for dependencies";
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# Check for dependencies
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for SWARE in git gcc g++ gfortran rsync make
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do
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SWARE_PRESENT=`which $SWARE`;
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if [ -z "$SWARE_PRESENT" ]; then # check if string is not empty
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echo "ERROR: Install $SWARE before continuing ... aborting";
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exit;
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else
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echo " Using $SWARE present at $SWARE_PRESENT";
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fi
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done
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if [ "$platform" = "mac" ] ; then
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if [ -d "/opt/local/bin" ]; then
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echo " ";
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echo "Looks like you are using the MacPorts package manager so you will need to";
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echo "use the --compiler_version option and run the Install script manually.";
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echo "looks like the available GNU compilers are:";
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ls -l /opt/local/bin/gcc-m*
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ls -l /opt/local/bin/g++-m*
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ls -l /opt/local/bin/gfortran-m*
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echo "to find out more about Install command line options do a ./Install -h";
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else
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if [ -d "/usr/local/Homebrew" ]; then
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echo " ";
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echo "Looks like you are using the Homebrew package manager. If the compilers";
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echo "were found then you will need to use the --compiler_version -6 option when";
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echo "invoking the Install command line.";
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else
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echo "Did not find MacPorts or Homebrew. If you are using something else";
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echo "proceed with caution.";
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fi
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fi
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if [ ! -d "/Applications/Xcode.app" ]; then
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SWARE_PRESENT=`which make`;
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if [ -z "$SWARE_PRESENT" ]; then # check if string is not empty
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echo "ERROR: Install command line tools for XCode before continuing ... aborting";
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exit;
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else
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echo " Using $SWARE present at $SWARE_PRESENT";
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echo " So assuming a development tool-chain is present.";
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fi
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fi
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fi
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echo "Step 1 Check for dependencies ... DONE";
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echo " ";
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echo "Step 2 Downloading source and checking out latest...";
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# clone git repositories into esru/tmp
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if [ ! -d "esru" ]; then
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mkdir esru
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fi
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if [ ! -d "esru/tmp" ]; then
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mkdir esru/tmp
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else
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rm -rf esru/tmp/ESP-r*
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fi
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echo " ";
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git clone --recursive https://github.com/ESP-rCommunity/ESP-rSource.git esru/tmp/ESP-rSource
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echo " ";
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git clone --recursive https://github.com/ESP-rCommunity/ESP-rDatabases.git esru/tmp/ESP-rDatabases
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echo " ";
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git clone --recursive https://github.com/ESP-rCommunity/ESP-rModels.git esru/tmp/ESP-rModels
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echo " ";
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git clone --recursive https://github.com/ESP-rCommunity/ESP-rDoc.git esru/tmp/ESP-rDoc
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echo "Step 2 Downloading source...PASSED";
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echo " ";
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# Copy the individual repositories to standard locations for Install script to work
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echo "Step 3 Assembling repositories into ESP-rMaster folders...";
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if [ ! -d "ESP-rMaster" ]; then
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mkdir ESP-rMaster
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else
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rm -rf ESP-rMaster/*
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fi
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rsync -a esru/tmp/ESP-rSource/ ESP-rMaster/
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rsync -a esru/tmp/ESP-rDatabases/ ESP-rMaster/data/
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rsync -a esru/tmp/ESP-rDoc/ ESP-rMaster/doc/
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rsync -a esru/tmp/ESP-rModels/ ESP-rMaster/models/
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rm -rf ESP-rMaster/*/.git*
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echo "Step 3 Assembling repositories into ESP-rMaster folders... DONE";
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echo " ";
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echo "Step 4 Install ESP-r distribution...";
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if [ "$platform" = "linux" ] ||
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[ "$platform" = "cygwin" ] ||
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[ "$platform" = "mac" ] ; then
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if [ ! -d "/opt" ]; then
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mkdir /opt
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fi
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if [ ! -d "/opt/esru" ]; then
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mkdir /opt/esru
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else
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rm -rf /opt/esru/*
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fi
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fi
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if [ "$platform" = "mingw" ] ; then
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if [ ! -d "C:/ESRU" ]; then
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mkdir C:/ESRU
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echo "The $PATH environment variable will be updated.";
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else
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rm -rf C:/ESRU/*
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fi
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fi
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cd ESP-rMaster
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# Confirm running Install script.
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echo " ";
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echo "The default Install script parameters will be:";
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if [ "$platform" = "linux" ] ||
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[ "$platform" = "cygwin" ] ; then
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echo "./Install_o2 -d /opt/esru --debug --X11 --gcc4 --silent --force";
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fi
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if [ "$platform" = "mac" ] ; then
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if [ -d "/usr/local/Homebrew" ]; then
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echo "Suggest invoking Install with --compiler_version -6 ";
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echo "./Install_o2 -d /opt/esru --debug --X11 --gcc4 --silent --force --compiler_version -6";
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else
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echo "Suggest invoking Install with --compile_version -mp-5 ";
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echo "./Install_o2 -d /opt/esru --debug --X11 --gcc4 --silent --force --compiler_version -mp-5";
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fi
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fi
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if [ "$platform" = "mingw" ] ; then
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echo "./Install_o2 -d C:/ESRU --debug --GTK --gcc4";
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fi
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echo "and all databases and exemplars will be installed.";
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echo "To find out more about Install command line options do a ./Install -h";
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if [ "$platform" = "mac" ] ; then
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echo "For OSX we suggest manual invocation of the Install script.";
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fi
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echo " ";
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echo "Proceed with running the ESP-r Install script? A no allows you";
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echo "to invoke Install script manually.";
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YN=none;
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while [ "$YN" != "y" ] && [ "$YN" != "n" ] && [ "$YN" != "" ]
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do
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if [ "$YN" != "none" ]; then
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echo " "
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echo "Please answer yes or no (y/n) [y]."
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fi
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read YN
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done
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if [ "$YN" = "n" ]; then
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# tell user to run Install manually.
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echo "Manually run the Install script with your own options e.g.";
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echo "cd ESP-rMaster";
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echo "sudo ./Install -d /opt/esru --debug --gcc4";
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echo "and then manually remove the esru and esru/tmp folders.";
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if [ "$platform" = "mingw" ] ; then
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echo "After compiling you should also run the copy_dll_to_c_esru_esp-r_bin.bash";
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echo "command in the ESPrMaster folder to place dependencies in the";
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echo "C:/ESRU/esp-r/bin folder.";
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fi
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exit;
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fi
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if [ "$platform" = "linux" ] ||
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[ "$platform" = "cygwin" ] ; then
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./Install_o1 -d /opt/esru --debug --X11 --gcc4 --silent --force
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fi
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if [ "$platform" = "mac" ] ; then
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if [ -d "/usr/local/Homebrew" ]; then
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./Install_o1 -d /opt/esru --debug --X11 --gcc4 --silent --force --compiler_version -6
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else
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./Install_o1 -d /opt/esru --debug --X11 --gcc4 --silent --force --compiler_version -mp-5
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fi
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fi
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if [ "$platform" = "mingw" ] ; then
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echo "For MSYS2 say no to XML output, choose GTK, say yes to databases and models.";
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./Install_o2 -d C:/ESRU --debug --GTK --gcc4
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echo " ";
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echo "After compiling you should also run the copy_dll_to_c_esru_esp-r_bin.bash";
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echo "command in the ESPrMaster folder to place dependencies in the";
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echo "C:/ESRU/esp-r/bin folder.";
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echo "Do this BEFORE you clean up the folders!";
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echo " ";
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fi
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echo " ";
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echo "Step 4 Install ESP-r distribution... DONE";
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echo " ";
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echo "Step 5 Add executable links in /usr/bin so bash shell can find stuff";
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if [ "$platform" = "mac" ] ; then
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if [ ! -d "$HOME/bin" ]; then
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mkdir $HOME/bin
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fi
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fi
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for executable in aco b2e bps dbm dfs cdb c2e clm e2r ecnv eco enet grd ish mfs mld mrt pdb prj res stats vew
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do
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if [ "$platform" = "linux" ] ||
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[ "$platform" = "cygwin" ] ; then
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ln -s /opt/esru/esp-r/bin/$executable /usr/bin/$executable
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fi
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if [ "$platform" = "mac" ] ; then
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ln -s /opt/esru/esp-r/bin/$executable /$HOME/bin/$executable
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fi
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done
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echo " ";
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echo "Step 6 Cleaning object files from the compile in ESPrMaster ...";
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echo " ";
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cd src
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make clean
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echo " ";
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echo "Step 7 Cleaning downloaded repositories (in esru/tmp) ...";
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echo "[say n if you want to do this yourself]";
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echo "Proceed with these tasks?";
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YN=none;
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while [ "$YN" != "y" ] && [ "$YN" != "n" ] && [ "$YN" != "" ]
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do
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if [ "$YN" != "none" ]; then
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echo " ";
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echo "Please answer yes or no (y/n) [y].";
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fi
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read YN
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done
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if [ "$YN" = "n" ]; then
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# tell user to cleanup manually.
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echo "Manually cleanup the folders esru and esru/tmp";
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exit;
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else
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# At the end remove temporary files and folders
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cd ..
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rm -rf esru/tmp/*
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rm -rf esru/*
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fi
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# Check that prj can be found.
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PRJ_PRESENT=`which prj`;
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if [ -z "$PRJ_PRESENT" ]; then # check if string is not empty
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echo "ERROR: ESP-r Project Manager not yet found - check paths.";
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else
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echo "Checking ESP-r Project Manager is present at $PRJ_PRESENT";
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echo "looks like you are good to go!";
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fi

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