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phoman14 now push to GalaxyCLI #305

phoman14 now push to GalaxyCLI

phoman14 now push to GalaxyCLI #305

Triggered via push October 21, 2025 16:17
Status Success
Total duration 4m 40s
Artifacts
Activating_Parser  /  ...  /  Checks
2s
Activating_Parser / Action_Pack / Checks
Activating_Parser  /  ...  /  Push Check to by phoman14
4m 22s
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14
Activating_Parser  /  ...  /  Document_GitHub_Page_CD
Activating_Parser / Action_Pack / CD_Main / Document_GitHub_Page_CD
Activating_Parser  /  ...  /  Test_merge_merged
Activating_Parser / Action_Pack / Gitflow_R_Test / Test_merge_merged
Activating_Parser  /  ...  /  Test_merge_open
Activating_Parser / Action_Pack / Gitflow_R_Test / Test_merge_open
Activating_Parser  /  ...  /  Test_push
Activating_Parser / Action_Pack / Gitflow_R_Test / Test_push
Activating_Parser  /  ...  /  Integration_Test_and_Check
Activating_Parser / Action_Pack / Main_Merge_Check / Integration_Test_and_Check
Activating_Parser  /  ...  /  Continuous_Deployment_As_Dev
Activating_Parser / Action_Pack / Release_CD / Continuous_Deployment_As_Dev
Activating_Parser  /  ...  /  All_Unit_Tests
Activating_Parser / Action_Pack / Release_Merge_Check / All_Unit_Tests
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Annotations

10 warnings
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L65
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=65,col=15,[assignment_linter] Use <-, not =, for assignment.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L64
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=64,col=1,[trailing_whitespace_linter] Trailing whitespace is superfluous.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L62
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=62,col=9,[object_name_linter] Variable and function name style should be dotted.case, lowercase or camelCase.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L60
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=60,col=9,[object_name_linter] Variable and function name style should be dotted.case, lowercase or camelCase.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L55
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=55,col=17,[object_usage_linter] no visible global function definition for ‘GetAssayData’
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L55
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=55,col=15,[assignment_linter] Use <-, not =, for assignment.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L53
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=53,col=1,[trailing_whitespace_linter] Trailing whitespace is superfluous.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L52
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=52,col=1,[trailing_whitespace_linter] Trailing whitespace is superfluous.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: R/Annotate_Cell_Types.R#L42
file=/__w/SCWorkflow/SCWorkflow/R/Annotate_Cell_Types.R,line=42,col=1,[cyclocomp_linter] Functions should have cyclomatic complexity of less than 15, this has 18.
Activating_Parser / Action_Pack / Push_Check / Push Check to by phoman14: tests/testthat/test-cli.R#L7
file=/__w/SCWorkflow/SCWorkflow/tests/testthat/test-cli.R,line=7,col=3,[trailing_blank_lines_linter] Missing terminal newline.