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swanexe.sh
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#!/bin/bash
set -xa
# -----------------------------------------------------------
# UNIX Shell Script File
# Tested Operating System(s): RHEL 5,6
# Tested Run Level(s): 3, 5
# Shell Used: BASH shell
# Original Author(s): [email protected]
# File Creation Date: 01/25/2011
# Date Last Modified: 07/09/2013
#
# Version control: 1.12
#
# Support Team:
#
# Contributors:
# -----------------------------------------------------------
# ------------- Program Description and Details -------------
# -----------------------------------------------------------
#
# Script used to auto detect the hardware platform and select
# the correct SWAN binary.
#
# -----------------------------------------------------------
echo "in swanexe.sh"
set -x
env
CGNUM=$1
# Setup our NWPS environment
if [ "${USHnwps}" == "" ]
then
echo "FATAL ERROR: Your USHnwps variable is not set"
export err=1; err_chk
fi
# Check to see if our NWPS env is set
if [ "${NWPSenvset}" == "" ]
then
if [ -e ${USHnwps}/nwps_config.sh ];then
source ${USHnwps}/nwps_config.sh
else
"FATAL ERROR: Cannot find ${USHnwps}/nwps_config.sh"
export err=1; err_chk
fi
fi
cd ${RUNdir}
if [ "${ARCH}" == "" ] || [ "${ARCHBITS}" == "" ] || [ "${NUMCPUS}" == "" ] || [ "${MPIEXEC}" == "" ]
then
source ${USHnwps}/set_os_env.sh
fi
# Set ship transect output to 3 HR
#sed -i '/SHIPRT/ s/1.0 HR/3.0 HR/' INPUT
if [ "${MODELCORE}" == "SWAN" ]
then
echo "Starting SWAN executable for "${siteid}
# Get run PDY and cycle to check for the presence of hotfiles
yyyymmdd=`ls *.wnd | cut -c1-8`
hh=`ls *.wnd | cut -c9-10`
if [ "${siteid}" == "aer" ] || [ "${siteid}" == "afg" ] || [ "${siteid}" == "sew" ] \
|| [ "${siteid}" == "bro" ] || [ "${siteid}" == "crp" ] || [ "${siteid}" == "lch" ] \
|| [ "${siteid}" == "lix" ] || ( [ "${siteid}" == "mtr" ] && [ "${CGNUM}" == "1" ] ) \
|| ( [ "${siteid}" == "pqr" ] && [ "${CGNUM}" != "2" ] ) \
|| ( [ "${siteid}" == "mfr" ] && [ "${CGNUM}" == "1" ] ) \
|| ( [ "${siteid}" == "mfr" ] && [ "${CGNUM}" == "4" ] ) \
|| ( [ "${siteid}" == "mfr" ] && [ "${CGNUM}" == "5" ] )
then
# Check that all hotfiles are present
for i in {1..9}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-00"${i}
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-00${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-00${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-00"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-00"${i}
msg="WARNING - missing hotfile for core 0"${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..48}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-0"${i}
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-0${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-0${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-0"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-0"${i}
msg="WARNING - missing hotfile for core "${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
mpiexec -n 48 -ppn 48 ${EXECnwps}/swan.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
elif ( [ "${siteid}" == "mfr" ] && [ "${CGNUM}" != "1" ] ) \
|| ( [ "${siteid}" == "mfr" ] && [ "${CGNUM}" != "4" ] ) \
|| ( [ "${siteid}" == "mfr" ] && [ "${CGNUM}" != "5" ] )
then
# Check that all hotfiles are present
for i in {1..9}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-00"${i}
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-00${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-00${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-00"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-00"${i}
msg="WARNING - missing hotfile for core 0"${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..96}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-0"${i}
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-0${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-0${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-0"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-0"${i}
msg="WARNING - missing hotfile for core "${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
mpiexec -n 96 -ppn 48 ${EXECnwps}/swan.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
elif [ "${siteid}" == "lox" ]
then
# Check that all hotfiles are present
for i in {1..9}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-00"${i}
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-00${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-00${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-00"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-00"${i}
msg="WARNING - missing hotfile for core 0"${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..24}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-0"${i}
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-0${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-0${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-0"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-0"${i}
msg="WARNING - missing hotfile for core "${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
mpiexec -n 24 -ppn 24 ${EXECnwps}/swan.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
elif [ "${siteid}" == "ajk" ] \
|| ( [ "${siteid}" == "mtr" ] && [ "${CGNUM}" == "2" ] ) \
|| ( [ "${siteid}" == "mtr" ] && [ "${CGNUM}" == "3" ] ) \
|| ( [ "${siteid}" == "mtr" ] && [ "${CGNUM}" == "4" ] )
then
# Check that all hotfiles are present
for i in {1..9}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-00"${i}
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-00${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-00${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-00"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-00"${i}
msg="WARNING - missing hotfile for core 0"${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..99}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-0"${i}
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-0${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-0${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-0"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-0"${i}
msg="WARNING - missing hotfile for core "${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {100..120}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-"${i}
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-"${i}
msg="WARNING - missing hotfile for core "${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
mpiexec -n 120 -ppn 60 ${EXECnwps}/swan.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
else
# Check that all hotfiles are present
for i in {1..9}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-00"${i}
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-00${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-00${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-00"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-00"${i}
msg="WARNING - missing hotfile for core 0"${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..16}; do
echo "Checking hotfile for "${yyyymmdd}.${hh}"00-0"${i}
if [ -f ${RUNdir}/${yyyymmdd}.${hh}00-0${i} ] || [ -f ${RUNdir}/${PDYm1}.${hh}00-0${i} ]; then
echo "Found "${yyyymmdd}.${hh}"00-0"${i}
else
echo "Warning: Not found "${yyyymmdd}.${hh}"00-0"${i}
msg="WARNING - missing hotfile for core "${i}" for REGULAR GRID run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
mpiexec -n 16 -ppn 16 ${EXECnwps}/swan.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
fi
cp -f *CG1* ${DATA}/output/grid
if [ "${err}" != "0" ];then
msg="FATAL ERROR: Wave model executable swan.exe failed."
postmsg "$jlogfile" "$msg"
fi
err_chk
elif [ "${MODELCORE}" == "UNSWAN" ]
then
echo "Processing UNSWAN for "${siteid}" on CG"${CGNUM}
if [ "${CGNUM}" == "1" ]
then
echo "Starting PuNSWAN executable for "${siteid}" on CG"${CGNUM}
# Ensure grid has been configured for the Unstructured version of swan.
if [ ! -e ${RUNdir}/PE0000 ]
then
msg="ERROR - missing PE0000 directory for UNSTRUCTURED run. Reconfigure bathy_db for Unstr SWAN."
postmsg "$jlogfile" "$msg"
exit 1
fi
# Get run PDY and cycle to check for the presence of hotfiles
yyyymmdd=`ls *.wnd | cut -c1-8`
hh=`ls *.wnd | cut -c9-10`
# Run each domain with appropriate number of cores.
if [ "${siteid}" == "key" ] || [ "${siteid}" == "mfl" ] || [ "${siteid}" == "akq" ] \
|| [ "${siteid}" == "mlb" ] || [ "${siteid}" == "box" ] || [ "${siteid}" == "tbw" ] \
|| [ "${siteid}" == "sgx" ] || [ "${siteid}" == "chs" ] \
|| [ "${siteid}" == "ilm" ] || [ "${siteid}" == "phi" ] || [ "${siteid}" == "car" ] \
|| [ "${siteid}" == "tae" ]
then
echo "Copying required files for PuNSWAN run for "${siteid}
# Check that all hotfiles are present in the PE subfolders
for i in {0..9}; do
echo "Checking hotfile for PE000"${i}"/"${yyyymmdd}.${hh}"00"
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/PE000${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE000${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE000"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE000"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE000"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..95}; do
echo "Checking hotfile for PE00"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE00${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE00${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE00"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE00"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE00"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {0..9}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE000${i}/
done
for i in {10..95}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE00${i}/
done
echo "Starting PuNSWAN executable for "${siteid}
mpiexec -n 96 -ppn 48 ${EXECnwps}/punswan4110.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
cp ${RUNdir}/PE0000/PRINT ${RUNdir}/
cp -f *CG1* ${DATA}/output/grid
if [ "${err}" != "0" ];then
msg="FATAL ERROR: Wave model executable punswan4110.exe failed."
postmsg "$jlogfile" "$msg"
fi
err_chk
elif [ "${siteid}" == "hgx" ]
then
echo "Copying required files for PuNSWAN run for "${siteid}
# Check that all hotfiles are present in the PE subfolders
for i in {0..9}; do
echo "Checking hotfile for PE000"${i}"/"${yyyymmdd}.${hh}"00"
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/PE000${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE000${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE000"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE000"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE000"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..99}; do
echo "Checking hotfile for PE00"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE00${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE00${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE00"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE00"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE00"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {100..119}; do
echo "Checking hotfile for PE0"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE0${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE0${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE0"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE0"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE0"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {0..9}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE000${i}/
done
for i in {10..99}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE00${i}/
done
for i in {100..119}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE0${i}/
done
echo "Starting PuNSWAN executable for "${siteid}
mpiexec -n 120 -ppn 60 ${EXECnwps}/punswan4110.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
cp ${RUNdir}/PE0000/PRINT ${RUNdir}/
cp -f *CG1* ${DATA}/output/grid
if [ "${err}" != "0" ];then
msg="FATAL ERROR: Wave model executable punswan4110.exe failed."
postmsg "$jlogfile" "$msg"
fi
err_chk
elif [ "${siteid}" == "mob" ]
then
echo "Copying required files for PuNSWAN run for "${siteid}
# Check that all hotfiles are present in the PE subfolders
for i in {0..9}; do
echo "Checking hotfile for PE000"${i}"/"${yyyymmdd}.${hh}"00"
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/PE000${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE000${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE000"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE000"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE000"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..99}; do
echo "Checking hotfile for PE00"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE00${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE00${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE00"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE00"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE00"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {100..143}; do
echo "Checking hotfile for PE0"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE0${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE0${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE0"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE0"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE0"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {0..9}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE000${i}/
done
for i in {10..99}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE00${i}/
done
for i in {100..143}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE0${i}/
done
echo "Starting PuNSWAN executable for "${siteid}
mpiexec -n 144 -ppn 72 ${EXECnwps}/punswan4110.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
cp ${RUNdir}/PE0000/PRINT ${RUNdir}/
cp -f *CG1* ${DATA}/output/grid
if [ "${err}" != "0" ];then
msg="FATAL ERROR: Wave model executable punswan4110.exe failed."
postmsg "$jlogfile" "$msg"
fi
err_chk
elif [ "${siteid}" == "alu" ]
then
echo "Copying required files for PuNSWAN run for "${siteid}
# Check that all hotfiles are present in the PE subfolders
for i in {0..9}; do
echo "Checking hotfile for PE000"${i}"/"${yyyymmdd}.${hh}"00"
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/PE000${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE000${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE000"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE000"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE000"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..83}; do
echo "Checking hotfile for PE00"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE00${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE00${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE00"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE00"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE00"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {0..9}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE000${i}/
done
for i in {10..83}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE00${i}/
done
echo "Starting PuNSWAN executable for "${siteid}
mpiexec -n 84 -ppn 42 ${EXECnwps}/punswan4110.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
cp ${RUNdir}/PE0000/PRINT ${RUNdir}/
cp -f *CG1* ${DATA}/output/grid
if [ "${err}" != "0" ];then
msg="FATAL ERROR: Wave model executable punswan4110.exe failed."
postmsg "$jlogfile" "$msg"
fi
err_chk
elif [ "${siteid}" == "okx" ]
then
echo "Copying required files for PuNSWAN run for "${siteid}
# Check that all hotfiles are present in the PE subfolders
for i in {0..9}; do
echo "Checking hotfile for PE000"${i}"/"${yyyymmdd}.${hh}"00"
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/PE000${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE000${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE000"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE000"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE000"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..59}; do
echo "Checking hotfile for PE00"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE00${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE00${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE00"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE00"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE00"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {0..9}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE000${i}/
done
for i in {10..59}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE00${i}/
done
echo "Starting PuNSWAN executable for "${siteid}
mpiexec -n 60 -ppn 60 ${EXECnwps}/punswan4110.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
cp ${RUNdir}/PE0000/PRINT ${RUNdir}/
cp -f *CG1* ${DATA}/output/grid
if [ "${err}" != "0" ];then
msg="FATAL ERROR: Wave model executable punswan4110.exe failed."
postmsg "$jlogfile" "$msg"
fi
err_chk
elif [ "${siteid}" == "sju" ] || [ "${siteid}" == "gum" ] || [ "${siteid}" == "jax" ] \
|| [ "${siteid}" == "hfo" ] || [ "${siteid}" == "mhx" ] || [ "${siteid}" == "gyx" ]
then
echo "Copying required files for PuNSWAN run for "${siteid}
# Check that all hotfiles are present in the PE subfolders
for i in {0..9}; do
echo "Checking hotfile for PE000"${i}"/"${yyyymmdd}.${hh}"00"
# Note: Checking also for PDYm1 to allow running of a late cycle from previous day
if [ -f ${RUNdir}/PE000${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE000${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE000"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE000"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE000"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {10..47}; do
echo "Checking hotfile for PE00"${i}"/"${yyyymmdd}.${hh}"00"
if [ -f ${RUNdir}/PE00${i}/${yyyymmdd}.${hh}00 ] || [ -f ${RUNdir}/PE00${i}/${PDYm1}.${hh}00 ]; then
echo "Found PE00"${i}"/"${yyyymmdd}.${hh}"00"
else
echo "Warning: Not found PE00"${i}"/"${yyyymmdd}.${hh}"00"
msg="WARNING - missing hotfile in PE00"${i}" directory for UNSTRUCTURED run. Will execute a cold start run."
postmsg "$jlogfile" "$msg"
sed -i '/INITial HOTStart/c\INIT DEFault' INPUT
fi
done
for i in {0..9}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE000${i}/
done
for i in {10..47}; do
cp ${RUNdir}/INPUT ${RUNdir}/PE00${i}/
done
echo "Starting PuNSWAN executable for "${siteid}
mpiexec -n 48 -ppn 48 ${EXECnwps}/punswan4110.exe
export err=$?;
echo "Exit Code: ${err}" | tee -a ${LOGdir}/swan_exe_error.log
cp ${RUNdir}/PE0000/PRINT ${RUNdir}/
cp -f *CG1* ${DATA}/output/grid
if [ "${err}" != "0" ];then
msg="FATAL ERROR: Wave model executable punswan4110.exe failed."
postmsg "$jlogfile" "$msg"
fi
err_chk
fi
fi
# Interpolate unstructured mesh results onto regular grid for AWIPS (parameter names from SWAN manual)
echo "Interpolating unstructured mesh results for "${siteid}" on CG"${CGNUM}
cp ${DATA}/install/swn_reginterpCG${CGNUM}.py ${RUNdir}/
cat /dev/null > ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} HSIG ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} WIND ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} TPS ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} DIR ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} PDIR ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} VEL ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} WATL ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
echo "${PYTHON} ${RUNdir}/swn_reginterpCG${CGNUM}.py ${RUNdir}/ CG_UNSTRUC.nc CG${CGNUM} HSWE ${siteid}" >> ${RUNdir}/reginterpCG${CGNUM}_cmdfile
mpiexec -np 8 --cpu-bind verbose,core cfp ${RUNdir}/reginterpCG${CGNUM}_cmdfile
export err=$?; err_chk
fi
exit 0
# -----------------------------------------------------------
# *******************************
# ********* End of File *********
# *******************************