diff --git a/.github/workflows/codecov.yml b/.github/workflows/codecov.yml index 05a74524..03675b52 100644 --- a/.github/workflows/codecov.yml +++ b/.github/workflows/codecov.yml @@ -20,7 +20,7 @@ jobs: fetch-tags: true persist-credentials: false - name: Setup Python - uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 + uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0 with: python-version: 3.13 - name: Install dependencies @@ -32,7 +32,7 @@ jobs: run: | pytest -v --cov=gaps --cov-report=html --cov-branch --cov-report=xml:coverage.xml --cov-fail-under=95 - name: Upload coverage to Codecov - uses: codecov/codecov-action@57e3a136b779b570ffcdbf80b3bdc90e7fab3de2 + uses: codecov/codecov-action@57e3a136b779b570ffcdbf80b3bdc90e7fab3de2 # v6.0.0 with: token: ${{ secrets.CODECOV_TOKEN }} files: ./coverage.xml diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml index b5170ebc..0dfc0012 100644 --- a/.github/workflows/docs.yml +++ b/.github/workflows/docs.yml @@ -21,7 +21,7 @@ jobs: fetch-tags: true persist-credentials: false - - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 + - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 # v0.9.5 with: pixi-version: v0.62.2 locked: true @@ -35,7 +35,7 @@ jobs: pixi run -e dev python-docs - name: deploy - uses: peaceiris/actions-gh-pages@4f9cc6602d3f66b9c108549d475ec49e8ef4d45e + uses: peaceiris/actions-gh-pages@4f9cc6602d3f66b9c108549d475ec49e8ef4d45e # v4.0.0 if: startsWith(github.ref, 'refs/tags/v') with: github_token: ${{ secrets.GITHUB_TOKEN }} diff --git a/.github/workflows/linter.yml b/.github/workflows/linter.yml index 52a0525f..e68df938 100644 --- a/.github/workflows/linter.yml +++ b/.github/workflows/linter.yml @@ -19,12 +19,12 @@ jobs: fetch-depth: 0 fetch-tags: true persist-credentials: false - - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6 + - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6 # v3.6.1 with: version: "latest" args: check src: "./gaps" - - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6 + - uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6 # v3.6.1 with: version: "latest" args: format --check diff --git a/.github/workflows/pixi_tests.yml b/.github/workflows/pixi_tests.yml index 332632d3..82641702 100644 --- a/.github/workflows/pixi_tests.yml +++ b/.github/workflows/pixi_tests.yml @@ -25,7 +25,7 @@ jobs: fetch-tags: true persist-credentials: false - - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 + - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 # v0.9.5 with: pixi-version: v0.62.2 locked: true diff --git a/.github/workflows/pr_rev_cli_tests.yml b/.github/workflows/pr_rev_cli_tests.yml index 60ed94bf..0d2ae2ec 100644 --- a/.github/workflows/pr_rev_cli_tests.yml +++ b/.github/workflows/pr_rev_cli_tests.yml @@ -25,7 +25,7 @@ jobs: fetch-tags: true persist-credentials: false - name: Set up Python - uses: conda-incubator/setup-miniconda@fc2d68f6413eb2d87b895e92f8584b5b94a10167 + uses: conda-incubator/setup-miniconda@fc2d68f6413eb2d87b895e92f8584b5b94a10167 # v3.3.0 with: auto-update-conda: true python-version: 3.13 diff --git a/.github/workflows/publish_to_pypi.yml b/.github/workflows/publish_to_pypi.yml index 00f3d55d..c0fd72eb 100644 --- a/.github/workflows/publish_to_pypi.yml +++ b/.github/workflows/publish_to_pypi.yml @@ -22,7 +22,7 @@ jobs: fetch-tags: true persist-credentials: false - - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 + - uses: prefix-dev/setup-pixi@1b2de7f3351f171c8b4dfeb558c639cb58ed4ec0 # v0.9.5 with: pixi-version: v0.62.2 locked: true @@ -34,4 +34,4 @@ jobs: run: pixi run -e dev build-wheels - name: Publish package distributions to PyPI - uses: pypa/gh-action-pypi-publish@ed0c53931b1dc9bd32cbe73a98c7f6766f8a527e + uses: pypa/gh-action-pypi-publish@ed0c53931b1dc9bd32cbe73a98c7f6766f8a527e # v1.13.0 diff --git a/.github/workflows/release_drafter.yml b/.github/workflows/release_drafter.yml index 560f1d03..697dff5c 100644 --- a/.github/workflows/release_drafter.yml +++ b/.github/workflows/release_drafter.yml @@ -12,6 +12,6 @@ jobs: pull-requests: write steps: - name: Release Drafter - uses: release-drafter/release-drafter@5de93583980a40bd78603b6dfdcda5b4df377b32 + uses: release-drafter/release-drafter@5de93583980a40bd78603b6dfdcda5b4df377b32 # v7.2.0 env: GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} diff --git a/.github/workflows/super_linter.yml b/.github/workflows/super_linter.yml index 96e42f74..ce758b6b 100644 --- a/.github/workflows/super_linter.yml +++ b/.github/workflows/super_linter.yml @@ -29,7 +29,7 @@ jobs: persist-credentials: false - name: Lint Code Base - uses: super-linter/super-linter/slim@61abc07d755095a68f4987d1c2c3d1d64408f1f9 + uses: super-linter/super-linter/slim@61abc07d755095a68f4987d1c2c3d1d64408f1f9 # v8.5.0 env: VALIDATE_ALL_CODEBASE: false VALIDATE_BIOME_LINT: false diff --git a/.github/workflows/tests_tox.yml b/.github/workflows/tests_tox.yml index 9e267b56..32d6bdb5 100644 --- a/.github/workflows/tests_tox.yml +++ b/.github/workflows/tests_tox.yml @@ -28,7 +28,7 @@ jobs: persist-credentials: false - name: Set up Python ${{ matrix.python-version }} - uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 + uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0 with: python-version: ${{ matrix.python-version }} cache: 'pip' @@ -39,7 +39,7 @@ jobs: python -m pip install tox tox-gh-actions>=2.0 - name: Load tox cache - uses: actions/cache/restore@27d5ce7f107fe9357f9df03efb73ab90386fccae + uses: actions/cache/restore@27d5ce7f107fe9357f9df03efb73ab90386fccae # v5.0.5 with: path: .tox/ key: ${{ runner.os }}-${{ matrix.python-version }}-tox-v1-${{ hashFiles('**/pyproject.toml') }} @@ -53,7 +53,7 @@ jobs: - name: Save tox cache only on main if: github.ref == 'refs/heads/main' - uses: actions/cache/save@27d5ce7f107fe9357f9df03efb73ab90386fccae + uses: actions/cache/save@27d5ce7f107fe9357f9df03efb73ab90386fccae # v5.0.5 with: path: .tox/ key: ${{ runner.os }}-${{ matrix.python-version }}-tox-v1-${{ hashFiles('**/pyproject.toml') }} @@ -77,7 +77,7 @@ jobs: persist-credentials: false - name: Set up Python 3.9 - uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 + uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0 with: python-version: 3.9 diff --git a/.github/workflows/wildows_pytests.yml b/.github/workflows/wildows_pytests.yml index 5c4b0fb2..bec34f39 100644 --- a/.github/workflows/wildows_pytests.yml +++ b/.github/workflows/wildows_pytests.yml @@ -20,7 +20,7 @@ jobs: fetch-tags: true persist-credentials: false - name: Set up Python ${{ matrix.python-version }} - uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 + uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0 with: python-version: ${{ matrix.python-version }} - 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