Prefer fit_quick.png in quick-update display candidates #21
Workflow file for this run
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| name: NSS install smoke | |
| # Phase 4 of nss_first_class_sampler — verifies that the documented two-step | |
| # install (`pip install autofit[nss]` followed by the manual `pip install | |
| # git+...` for the handley-lab/blackjax fork and yallup/nss) lands a working | |
| # NSS environment. | |
| # | |
| # Why two steps: PyPI bans `git+https://` URLs in uploaded wheel metadata | |
| # (rejection: "400 Can't have direct dependency"), so the fork-based deps | |
| # cannot live in pyproject.toml's [nss] extra. The SHAs themselves are | |
| # documented in PyAutoFit/pyproject.toml just above the [nss] entry — keep | |
| # the two in sync. | |
| # | |
| # Runs on every PR (so we catch local regressions in pyproject.toml or in | |
| # the documented manual install before merging) and on a weekly cron (so we | |
| # catch upstream regressions in handley-lab/blackjax or yallup/nss that | |
| # drift past the pinned SHAs). | |
| on: | |
| pull_request: | |
| schedule: | |
| # Sundays at 03:00 UTC — quiet hours, catches upstream drift weekly. | |
| - cron: '0 3 * * 0' | |
| jobs: | |
| fresh_venv_install: | |
| name: Fresh-venv install of autofit[nss] | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 20 | |
| steps: | |
| - name: Checkout PyAutoConf | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: PyAutoLabs/PyAutoConf | |
| path: PyAutoConf | |
| - name: Checkout PyAutoFit | |
| uses: actions/checkout@v4 | |
| with: | |
| path: PyAutoFit | |
| - name: Set up Python 3.12 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Upgrade pip | |
| run: python -m pip install --upgrade pip | |
| - name: Install PyAutoConf | |
| run: python -m pip install -e PyAutoConf | |
| - name: Install PyAutoFit with [nss] extra | |
| run: python -m pip install -e PyAutoFit[nss] | |
| - name: Install handley-lab/blackjax and yallup/nss (manual, post-extras) | |
| # Mirrors the documented two-step install path. Keep these SHAs in | |
| # sync with the block at the top of PyAutoFit/pyproject.toml's [nss] | |
| # comment — that's the single source of truth. | |
| run: | | |
| python -m pip install \ | |
| "blackjax @ git+https://github.com/handley-lab/blackjax.git@ef45acd2f2fa0cca15adbdcd3ff7cb3a98987cb5" \ | |
| "nss @ git+https://github.com/yallup/nss.git@69159b0f4a3a53123b9eec7df91e4ed3885e4dc4" | |
| - name: Import smoke | |
| run: | | |
| python -c " | |
| import autofit as af | |
| import nss.ns | |
| import blackjax | |
| # Confirm the right blackjax fork landed (mainline does not have | |
| # blackjax.ns.adaptive — this attribute access is the canonical | |
| # check for the handley-lab fork). | |
| import blackjax.ns.adaptive | |
| assert hasattr(blackjax.ns.adaptive, 'init'), ( | |
| 'blackjax.ns.adaptive.init missing — wrong blackjax installed?' | |
| ) | |
| # Confirm af.NSS instantiates without ImportError. | |
| search = af.NSS(n_live=10, num_mcmc_steps=2, num_delete=5, termination=-1.0) | |
| assert search.checkpoint_interval == 100 | |
| print('NSS install smoke: OK') | |
| print(f' blackjax version: {blackjax.__version__}') | |
| print(f' nss installed at: {nss.__file__}') | |
| " |