|
| 1 | +""" |
| 2 | +JAX-native Ludlow et al. 2016 mass-concentration relation. |
| 3 | +
|
| 4 | +Replaces the previous ``jax.pure_callback``-wrapped call to |
| 5 | +``colossus.halo.concentration`` (formerly in ``mcr_util.py``). The |
| 6 | +algorithm follows colossus' ``modelLudlow16`` (``concentration.py`` |
| 7 | +lines 1104-1192) and ``modelEisenstein98`` (``power_spectrum.py`` |
| 8 | +lines 476-608) line-for-line, but every operation is done in pure |
| 9 | +``xp.*`` arithmetic so the same function runs under both numpy |
| 10 | +(``xp=np``) and JAX (``xp=jnp``). |
| 11 | +
|
| 12 | +Validated in PR #402 (Phase 1 feasibility): max relative error in |
| 13 | +c200c vs colossus over the lensing parameter grid |
| 14 | +(log M ∈ [10, 14] Msun/h, z ∈ [0.1, 2.5]) is **7.5 × 10⁻⁴**, with |
| 15 | +end-to-end downstream errors in convergence/deflection of ≤ 8 × 10⁻⁴. |
| 16 | +The 0.13 dex intrinsic Ludlow16 scatter is ~350× larger. |
| 17 | +
|
| 18 | +Units (matching colossus throughout): |
| 19 | + M200c is in Msun / h |
| 20 | + R is in Mpc / h |
| 21 | + z is dimensionless redshift |
| 22 | +""" |
| 23 | + |
| 24 | +import numpy as np |
| 25 | + |
| 26 | + |
| 27 | +# Colossus' 'planck15' preset — the cosmology the previous callback used |
| 28 | +# internally to compute concentration. autogalaxy's own Planck15 (Om0=0.3075) |
| 29 | +# is used for everything else in mcr_util.ludlow16_cosmology; this constant is |
| 30 | +# only for the concentration call. Keeping the split is an apples-to-apples |
| 31 | +# swap with the previous behaviour; unifying the two is a separate decision. |
| 32 | +PLANCK15_COSMOLOGY = dict( |
| 33 | + h=0.6774, |
| 34 | + Om0=0.3089, |
| 35 | + Ob0=0.0486, |
| 36 | + Tcmb0=2.7255, |
| 37 | + sigma8=0.8159, |
| 38 | + ns=0.9667, |
| 39 | +) |
| 40 | + |
| 41 | + |
| 42 | +def _gammainc(a, x, xp): |
| 43 | + if xp is np: |
| 44 | + from scipy.special import gammainc |
| 45 | + else: |
| 46 | + from jax.scipy.special import gammainc |
| 47 | + return gammainc(a, x) |
| 48 | + |
| 49 | + |
| 50 | +def _erfc(arg, xp): |
| 51 | + if xp is np: |
| 52 | + from scipy.special import erfc |
| 53 | + else: |
| 54 | + from jax.scipy.special import erfc |
| 55 | + return erfc(arg) |
| 56 | + |
| 57 | + |
| 58 | +# --------------------------------------------------------------------------- |
| 59 | +# Eisenstein & Hu 1998 transfer function — direct port of |
| 60 | +# colossus.cosmology.power_spectrum.modelEisenstein98. |
| 61 | +# --------------------------------------------------------------------------- |
| 62 | + |
| 63 | + |
| 64 | +def transfer_eh98(k, h, Om0, Ob0, Tcmb0, xp=np): |
| 65 | + """EH98 transfer function T(k) including baryon acoustic features.""" |
| 66 | + omc = Om0 - Ob0 |
| 67 | + ombom0 = Ob0 / Om0 |
| 68 | + h2 = h ** 2 |
| 69 | + om0h2 = Om0 * h2 |
| 70 | + ombh2 = Ob0 * h2 |
| 71 | + theta2p7 = Tcmb0 / 2.7 |
| 72 | + theta2p72 = theta2p7 ** 2 |
| 73 | + theta2p74 = theta2p72 ** 2 |
| 74 | + |
| 75 | + kh = k * h |
| 76 | + |
| 77 | + zeq = 2.50e4 * om0h2 / theta2p74 |
| 78 | + keq = 7.46e-2 * om0h2 / theta2p72 |
| 79 | + |
| 80 | + b1d = 0.313 * om0h2 ** -0.419 * (1.0 + 0.607 * om0h2 ** 0.674) |
| 81 | + b2d = 0.238 * om0h2 ** 0.223 |
| 82 | + zd = 1291.0 * om0h2 ** 0.251 / (1.0 + 0.659 * om0h2 ** 0.828) * ( |
| 83 | + 1.0 + b1d * ombh2 ** b2d |
| 84 | + ) |
| 85 | + |
| 86 | + Rd = 31.5 * ombh2 / theta2p74 / (zd / 1e3) |
| 87 | + Req = 31.5 * ombh2 / theta2p74 / (zeq / 1e3) |
| 88 | + |
| 89 | + s = ( |
| 90 | + 2.0 |
| 91 | + / 3.0 |
| 92 | + / keq |
| 93 | + * xp.sqrt(6.0 / Req) |
| 94 | + * xp.log((xp.sqrt(1.0 + Rd) + xp.sqrt(Rd + Req)) / (1.0 + xp.sqrt(Req))) |
| 95 | + ) |
| 96 | + |
| 97 | + ksilk = 1.6 * ombh2 ** 0.52 * om0h2 ** 0.73 * (1.0 + (10.4 * om0h2) ** -0.95) |
| 98 | + |
| 99 | + q = kh / 13.41 / keq |
| 100 | + |
| 101 | + a1 = (46.9 * om0h2) ** 0.670 * (1.0 + (32.1 * om0h2) ** -0.532) |
| 102 | + a2 = (12.0 * om0h2) ** 0.424 * (1.0 + (45.0 * om0h2) ** -0.582) |
| 103 | + ac = a1 ** (-ombom0) * a2 ** (-(ombom0 ** 3)) |
| 104 | + |
| 105 | + b1 = 0.944 / (1.0 + (458.0 * om0h2) ** -0.708) |
| 106 | + b2 = (0.395 * om0h2) ** -0.0266 |
| 107 | + bc = 1.0 / (1.0 + b1 * ((omc / Om0) ** b2 - 1.0)) |
| 108 | + |
| 109 | + y = (1.0 + zeq) / (1.0 + zd) |
| 110 | + Gy = y * ( |
| 111 | + -6.0 * xp.sqrt(1.0 + y) |
| 112 | + + (2.0 + 3.0 * y) |
| 113 | + * xp.log((xp.sqrt(1.0 + y) + 1.0) / (xp.sqrt(1.0 + y) - 1.0)) |
| 114 | + ) |
| 115 | + |
| 116 | + ab = 2.07 * keq * s * (1.0 + Rd) ** (-3.0 / 4.0) * Gy |
| 117 | + |
| 118 | + f = 1.0 / (1.0 + (kh * s / 5.4) ** 4) |
| 119 | + |
| 120 | + C = 14.2 / ac + 386.0 / (1.0 + 69.9 * q ** 1.08) |
| 121 | + T0t = xp.log(xp.e + 1.8 * bc * q) / (xp.log(xp.e + 1.8 * bc * q) + C * q * q) |
| 122 | + |
| 123 | + C1bc = 14.2 + 386.0 / (1.0 + 69.9 * q ** 1.08) |
| 124 | + T0t1bc = xp.log(xp.e + 1.8 * bc * q) / ( |
| 125 | + xp.log(xp.e + 1.8 * bc * q) + C1bc * q * q |
| 126 | + ) |
| 127 | + Tc = f * T0t1bc + (1.0 - f) * T0t |
| 128 | + |
| 129 | + bb = ( |
| 130 | + 0.5 |
| 131 | + + ombom0 |
| 132 | + + (3.0 - 2.0 * ombom0) |
| 133 | + * xp.sqrt((17.2 * om0h2) * (17.2 * om0h2) + 1.0) |
| 134 | + ) |
| 135 | + |
| 136 | + bnode = 8.41 * om0h2 ** 0.435 |
| 137 | + |
| 138 | + st = s / (1.0 + (bnode / kh / s) * (bnode / kh / s) * (bnode / kh / s)) ** ( |
| 139 | + 1.0 / 3.0 |
| 140 | + ) |
| 141 | + |
| 142 | + C11 = 14.2 + 386.0 / (1.0 + 69.9 * q ** 1.08) |
| 143 | + T0t11 = xp.log(xp.e + 1.8 * q) / (xp.log(xp.e + 1.8 * q) + C11 * q * q) |
| 144 | + Tb = ( |
| 145 | + T0t11 / (1.0 + (kh * s / 5.2) ** 2) |
| 146 | + + ab / (1.0 + (bb / kh / s) ** 3) * xp.exp(-((kh / ksilk) ** 1.4)) |
| 147 | + ) * xp.sin(kh * st) / (kh * st) |
| 148 | + |
| 149 | + return ombom0 * Tb + omc / Om0 * Tc |
| 150 | + |
| 151 | + |
| 152 | +# --------------------------------------------------------------------------- |
| 153 | +# sigma(R, z=0): RMS of mass within top-hat radius R, normalised to sigma8. |
| 154 | +# --------------------------------------------------------------------------- |
| 155 | + |
| 156 | + |
| 157 | +def _tophat_window(x, xp=np): |
| 158 | + """W(x) = 3 (sin x - x cos x) / x^3, with a safe small-x expansion.""" |
| 159 | + small = x < 1.0e-3 |
| 160 | + x2 = x * x |
| 161 | + safe_small = 1.0 - x2 / 10.0 + x2 * x2 / 280.0 |
| 162 | + safe_large = 3.0 * (xp.sin(x) - x * xp.cos(x)) / xp.where(small, 1.0, x ** 3) |
| 163 | + return xp.where(small, safe_small, safe_large) |
| 164 | + |
| 165 | + |
| 166 | +def _sigma2_unnormalised( |
| 167 | + R, h, Om0, Ob0, Tcmb0, ns, |
| 168 | + xp=np, |
| 169 | + k_log_min=-5.0, k_log_max=3.0, nk=256, |
| 170 | +): |
| 171 | + """sigma^2(R) at z=0 for an unnormalised power spectrum P(k) = k^ns T(k)^2.""" |
| 172 | + ln_k = xp.linspace( |
| 173 | + k_log_min * xp.log(xp.asarray(10.0)), |
| 174 | + k_log_max * xp.log(xp.asarray(10.0)), |
| 175 | + nk, |
| 176 | + ) |
| 177 | + k = xp.exp(ln_k) |
| 178 | + |
| 179 | + Tk = transfer_eh98(k, h, Om0, Ob0, Tcmb0, xp=xp) |
| 180 | + Pk_unnorm = k ** ns * Tk ** 2 |
| 181 | + |
| 182 | + R = xp.atleast_1d(R) |
| 183 | + kR = k[None, :] * R[:, None] |
| 184 | + W = _tophat_window(kR, xp=xp) |
| 185 | + |
| 186 | + integrand = k[None, :] ** 3 * Pk_unnorm[None, :] * W ** 2 |
| 187 | + integrand = integrand / (2.0 * xp.pi ** 2) |
| 188 | + |
| 189 | + sigma2 = xp.trapezoid(integrand, ln_k, axis=-1) |
| 190 | + if sigma2.shape == (1,): |
| 191 | + return sigma2[0] |
| 192 | + return sigma2 |
| 193 | + |
| 194 | + |
| 195 | +def sigma_R( |
| 196 | + R, h, Om0, Ob0, Tcmb0, sigma8, ns, |
| 197 | + xp=np, |
| 198 | + k_log_min=-5.0, k_log_max=3.0, nk=256, |
| 199 | +): |
| 200 | + """sigma(R, z=0), normalised so sigma(R=8 Mpc/h) = sigma8.""" |
| 201 | + sigma2_unnorm = _sigma2_unnormalised( |
| 202 | + R, h, Om0, Ob0, Tcmb0, ns, |
| 203 | + xp=xp, k_log_min=k_log_min, k_log_max=k_log_max, nk=nk, |
| 204 | + ) |
| 205 | + sigma2_8_unnorm = _sigma2_unnormalised( |
| 206 | + xp.asarray(8.0), h, Om0, Ob0, Tcmb0, ns, |
| 207 | + xp=xp, k_log_min=k_log_min, k_log_max=k_log_max, nk=nk, |
| 208 | + ) |
| 209 | + norm = sigma8 ** 2 / sigma2_8_unnorm |
| 210 | + return xp.sqrt(norm * sigma2_unnorm) |
| 211 | + |
| 212 | + |
| 213 | +# --------------------------------------------------------------------------- |
| 214 | +# Linear growth factor D(z), flat LCDM (no relspecies). |
| 215 | +# Integral form (Eisenstein & Hu 1999 Eq. 8 / Heath 1977). |
| 216 | +# --------------------------------------------------------------------------- |
| 217 | + |
| 218 | + |
| 219 | +def _E_lcdm(z, Om0, Ode0, xp=np): |
| 220 | + return xp.sqrt(Om0 * (1.0 + z) ** 3 + Ode0) |
| 221 | + |
| 222 | + |
| 223 | +def _growth_unnormalised(z, Om0, Ode0, xp=np, nz=256, z_max=1.0e4): |
| 224 | + """D_+(z) un-normalised. Integrate (1+z') / E(z')^3 from z to z_max via u=ln(1+z').""" |
| 225 | + z_arr = xp.atleast_1d(z).astype(xp.float64) |
| 226 | + |
| 227 | + u_max = xp.log(xp.asarray(1.0 + z_max)) |
| 228 | + u_low = xp.log(1.0 + z_arr) |
| 229 | + u_grid = ( |
| 230 | + u_low[:, None] |
| 231 | + + (u_max - u_low)[:, None] * xp.linspace(0.0, 1.0, nz)[None, :] |
| 232 | + ) |
| 233 | + zp = xp.exp(u_grid) - 1.0 |
| 234 | + Ep = _E_lcdm(zp, Om0, Ode0, xp=xp) |
| 235 | + integrand = (1.0 + zp) ** 2 / Ep ** 3 |
| 236 | + integral = xp.trapezoid(integrand, u_grid, axis=-1) |
| 237 | + |
| 238 | + D = _E_lcdm(z_arr, Om0, Ode0, xp=xp) * integral |
| 239 | + if z_arr.shape == (): |
| 240 | + return D[0] |
| 241 | + return D |
| 242 | + |
| 243 | + |
| 244 | +def growth_factor(z, Om0, Ode0, xp=np, nz=256, z_max=1.0e4): |
| 245 | + """D(z) / D(0), normalised growth factor for flat LCDM.""" |
| 246 | + D_z = _growth_unnormalised(z, Om0, Ode0, xp=xp, nz=nz, z_max=z_max) |
| 247 | + D_0 = _growth_unnormalised(xp.asarray(0.0), Om0, Ode0, xp=xp, nz=nz, z_max=z_max) |
| 248 | + return D_z / D_0 |
| 249 | + |
| 250 | + |
| 251 | +# --------------------------------------------------------------------------- |
| 252 | +# Einasto enclosed-mass ratio. For alpha = 0.18 (the value colossus uses |
| 253 | +# internally in modelLudlow16), M(<r_s) / M(<c r_s) = P(3/alpha, 2/alpha) / |
| 254 | +# P(3/alpha, (2/alpha) c^alpha), where P is the regularised lower incomplete |
| 255 | +# gamma function. Independent of cosmology and halo mass. |
| 256 | +# --------------------------------------------------------------------------- |
| 257 | + |
| 258 | + |
| 259 | +_EINASTO_ALPHA = 0.18 |
| 260 | + |
| 261 | + |
| 262 | +def einasto_mass_ratio(c, xp=np, alpha=_EINASTO_ALPHA): |
| 263 | + """M(<r_s) / M(<c r_s) for an Einasto profile, dimensionless.""" |
| 264 | + s = 3.0 / alpha |
| 265 | + x_inner = 2.0 / alpha |
| 266 | + x_outer = 2.0 / alpha * c ** alpha |
| 267 | + return _gammainc(s, x_inner, xp=xp) / _gammainc(s, x_outer, xp=xp) |
| 268 | + |
| 269 | + |
| 270 | +# --------------------------------------------------------------------------- |
| 271 | +# Concentration solver — vectorised port of modelLudlow16. |
| 272 | +# --------------------------------------------------------------------------- |
| 273 | + |
| 274 | + |
| 275 | +_C_LUDLOW = 650.0 |
| 276 | +_F_LUDLOW = 0.02 |
| 277 | +_DELTA_COLLAPSE = 1.68647019984 # matches colossus.utils.constants.DELTA_COLLAPSE |
| 278 | + |
| 279 | + |
| 280 | +def _lagrangian_R(M, Om0, h, xp=np): |
| 281 | + """Lagrangian radius for mass M (Msun/h) → R (Mpc/h).""" |
| 282 | + # Critical density today: 2.77536627e11 Msun h^2 / Mpc^3. |
| 283 | + rho_crit_0 = 2.77536627e11 |
| 284 | + rho_m_0 = Om0 * rho_crit_0 |
| 285 | + return (3.0 * M / (4.0 * xp.pi * rho_m_0)) ** (1.0 / 3.0) |
| 286 | + |
| 287 | + |
| 288 | +def ludlow16_concentration( |
| 289 | + M200c_Msun_per_h, |
| 290 | + z, |
| 291 | + h, |
| 292 | + Om0, |
| 293 | + Ob0, |
| 294 | + Tcmb0, |
| 295 | + sigma8, |
| 296 | + ns, |
| 297 | + xp=np, |
| 298 | + Ode0=None, |
| 299 | + c_array_size=200, |
| 300 | + sigma_nk=256, |
| 301 | + growth_nz=256, |
| 302 | +): |
| 303 | + """ |
| 304 | + JAX-native port of ``colossus.halo.concentration.modelLudlow16``. |
| 305 | +
|
| 306 | + Assumes flat LCDM (``Ode0 = 1 - Om0`` if not supplied) and ignores |
| 307 | + relativistic species, matching the analytic LCDM branch in colossus. |
| 308 | +
|
| 309 | + Parameters |
| 310 | + ---------- |
| 311 | + M200c_Msun_per_h : float or scalar xp array |
| 312 | + Halo mass in Msun/h. |
| 313 | + z : float or scalar xp array |
| 314 | + Redshift. |
| 315 | + h, Om0, Ob0, Tcmb0, sigma8, ns : float |
| 316 | + Cosmology parameters. See ``PLANCK15_COSMOLOGY`` for the values |
| 317 | + matching colossus' built-in ``planck15`` preset. |
| 318 | + xp : module |
| 319 | + Numerical backend — ``numpy`` or ``jax.numpy``. |
| 320 | +
|
| 321 | + Returns |
| 322 | + ------- |
| 323 | + c200c : scalar xp array |
| 324 | + """ |
| 325 | + if Ode0 is None: |
| 326 | + Ode0 = 1.0 - Om0 |
| 327 | + |
| 328 | + M = xp.asarray(M200c_Msun_per_h, dtype=xp.float64) |
| 329 | + z = xp.asarray(z, dtype=xp.float64) |
| 330 | + |
| 331 | + c_array = xp.logspace(0.0, 2.0, c_array_size) |
| 332 | + |
| 333 | + M_ratio = einasto_mass_ratio(c_array, xp=xp) |
| 334 | + rho_f_rho_c = 200.0 * c_array ** 3 * M_ratio / _C_LUDLOW |
| 335 | + |
| 336 | + # Formation redshift (closed-form LCDM); entries with t1 <= 0 are invalid |
| 337 | + # (low-c, where the formation redshift becomes < -1) and are masked below. |
| 338 | + t1 = (rho_f_rho_c * (Om0 * (1.0 + z) ** 3 + Ode0) - Ode0) / Om0 |
| 339 | + valid_c = t1 > 0.0 |
| 340 | + t1_safe = xp.where(valid_c, t1, 1.0) |
| 341 | + zf = t1_safe ** (1.0 / 3.0) - 1.0 |
| 342 | + |
| 343 | + R_fM = _lagrangian_R(_F_LUDLOW * M, Om0, h, xp=xp) |
| 344 | + R_M = _lagrangian_R(M, Om0, h, xp=xp) |
| 345 | + |
| 346 | + sigma_fM = sigma_R(R_fM, h, Om0, Ob0, Tcmb0, sigma8, ns, xp=xp, nk=sigma_nk) |
| 347 | + sigma_M = sigma_R(R_M, h, Om0, Ob0, Tcmb0, sigma8, ns, xp=xp, nk=sigma_nk) |
| 348 | + sigma2_fM = sigma_fM ** 2 |
| 349 | + sigma2_M = sigma_M ** 2 |
| 350 | + |
| 351 | + D_z = growth_factor(z, Om0, Ode0, xp=xp, nz=growth_nz) |
| 352 | + delta_z = _DELTA_COLLAPSE / D_z |
| 353 | + D_zf = growth_factor(zf, Om0, Ode0, xp=xp, nz=growth_nz) |
| 354 | + delta_zf = _DELTA_COLLAPSE / D_zf |
| 355 | + |
| 356 | + arg = (delta_zf - delta_z) / xp.sqrt(2.0 * (sigma2_fM - sigma2_M)) |
| 357 | + rhs = _erfc(arg, xp=xp) |
| 358 | + |
| 359 | + # Solve M_ratio - rhs == 0 along c. Colossus trims c_array to entries |
| 360 | + # with t1 > 0 then np.interp; the un-trimmed array must remain monotonic |
| 361 | + # increasing in lhs_rhs for xp.interp. Pin invalid entries (low c) below |
| 362 | + # the lowest valid lhs_rhs (∈ [-1, 1]) so they sit at the bottom of xp. |
| 363 | + lhs_rhs = M_ratio - rhs |
| 364 | + lhs_rhs = xp.where(valid_c, lhs_rhs, -10.0) |
| 365 | + |
| 366 | + return xp.interp(0.0, lhs_rhs, c_array) |
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