Bug: hard-wired location of data dir

[lukasz99]

Hello,
it looks like location of datadir is set (in network_loader.py) as:
datadir = '/gscratch/spe/mpun/protein_holography/data'
whereas it should be adjusted to wherever the code is installed in.

Otherwise bumping up python version to 3.10 and tensorflow-gpu to 2.8
seems to work on Ubuntu 20.04.6 LTS, whereas the original settings (3.8/2.6)
fail. At least in my hands.

[michaelpun]

Hi, thanks for your interest and for pointing this out! I have changed to using a relative path in ba02d58 although I believe there may be more hardcoded paths do exist.

Regarding updating the python version, I think that this is something that I do not currently have the time to test and so I will not take on currently to ensure that the code works as completely as possible for people looking to reproduce the results from the paper. If you are looking for a more up-to-date codebase (and in general anyone interested in this code), you should check out Hermes which features a similar model that has been fine-tuned on stability predictions. for more accurate mutational effect prediction.