Fix spelling errors caught by codespell 2.2.6-1

The GHA container updated the version of codespell being usesd.  I can't
install codespell 2.2.6 on my local RHEL8 machine so I can't test this locally
:-(

Signed-off-by: Roscoe A. Bartlett <[email protected]>

Author: bartlettroscoe

.codespellrc

@@ -4,4 +4,4 @@ check-hidden =
 # Disable warnings about binary files
 quiet-level = 2
 skip = */.git,*/common_tools/cloc,*/TriBITSDoc,*/tribits/doc/guides/rst2latex.tex,*/*.js,*/*.svg,*/tribits/doc/sphinx/*/index.html,*~
-ignore-words-list = thur,inout,te,nd,lod,aci,nin,nnumber,wile,reall,bu,somewhere
+ignore-words-list = thur,inout,te,nd,lod,aci,nin,nnumber,wile,reall,bu,somewhere,strin

common_tools/git/hooks/post-receive-email

@@ -49,7 +49,7 @@
 # about what exactly happens in all the different cases that are handled,
 # possibly at the expense of introducing redundant code.
 #
-# Unused config options (annoucements list) were removed.  And the output
+# Unused config options (announcements list) were removed.  And the output
 # is much less geeky (far fewer sha1s)
 
 # ---------------------------- Functions

test/ci_support/CDashQueryAnalyzeReport_UnitTests.py

@@ -663,7 +663,7 @@ def test_col_3_row_2_bad_row_len_fail(self):
       self.assertEqual( str(errMsg),
         "Error, for CSV file '"+csvFileName+"' the data row 1"+\
         " ['val_10', 'val_11', 'val_12', 'extra'] has 4 entries"+\
-        " which does not macth the number of column headers 3!" )
+        " which does not match the number of column headers 3!" )
     if not threwException:
       self.assertFalse("ERROR: Did not throw an exception")
 
@@ -2474,7 +2474,7 @@ def test_nonpassingTest_downloadFromCDash(self):
 
     testHistoryBrowserUrl = u('site.com/cdash/queryTests.php?project=projectName&begin=2000-12-28&end=2001-01-01&filtercombine=and&filtercombine=&filtercount=3&showfilters=1&filtercombine=and&field1=buildname&compare1=61&value1=build_name&field2=testname&compare2=61&value2=test_name&field3=site&compare3=61&value3=site_name')
 
-    # Checkt the set fields out output
+    # Check the set fields out output
     self.assertEqual(testDict['site'], 'site_name')
     self.assertEqual(testDict['buildName'], 'build_name')
     self.assertEqual(testDict['buildName_url'],
@@ -2586,7 +2586,7 @@ def test_mdt_nonpassingTest_downloadFromCDash(self):
 
     testHistoryBrowserUrl = u('site.com/cdash/queryTests.php?project=projectName&begin=2000-12-29&end=2001-01-02&filtercombine=and&filtercombine=&filtercount=3&showfilters=1&filtercombine=and&field1=buildname&compare1=61&value1=build_name&field2=testname&compare2=61&value2=test_name&field3=site&compare3=61&value3=site_name')
 
-    # Checkt the set fields out output
+    # Check the set fields out output
     self.assertEqual(testDict['site'], 'site_name')
     self.assertEqual(testDict['buildName'], 'build_name')
     self.assertEqual(testDict['buildName_url'],
@@ -3234,7 +3234,7 @@ def test_funky_chars(self):
                                 buildName_url=buildName_url,
                                 siteName_url=siteName_url))
 
-    # Checkt the set fields out output
+    # Check the set fields out output
     self.assertEqual(funkyCharTestDict['site'], 'site name')
     self.assertEqual(funkyCharTestDict['buildName'], 'build++')
     self.assertEqual(funkyCharTestDict['buildName_url'],

test/ci_support/CMakeCache.large.txt

@@ -434,7 +434,7 @@ CMAKE_Fortran_FLAGS_RELWITHDEBINFO:STRING=-O2 -g -DNDEBUG
 //If set to non-empty, will override CMAKE_Fortran_FLAGS_RELWITHDEBINFO
 CMAKE_Fortran_FLAGS_RELWITHDEBINFO_OVERRIDE:STRING=
 
-//Base install directory (overridde default from "/usr/local" to
+//Base install directory (override default from "/usr/local" to
 // empty "")
 CMAKE_INSTALL_PREFIX:PATH=
 

test/ci_support/CMakeLists.txt

@@ -44,7 +44,7 @@
 add_subdirectory(DumpXmlDepsTests)
 
 # In case the project has ${PROJECT_NAME}_TRIBITS_DIR pointing to a symlink,
-# use the TriBITS implenetation in these test (which should be the same)
+# use the TriBITS implementation in these test (which should be the same)
 set(THIS_TRIBITS_DIR "${CMAKE_CURRENT_SOURCE_DIR}/../../tribits")
 
 
@@ -441,7 +441,7 @@ tribits_add_advanced_test( TribitsExampleProject_checkin_test
       TribitsExampleProject
     # NOTE: Had to use 'cp -r' instead of 'cmake -E copy_directory' because
     # the latter failed for a development version of CMake.  But since the
-    # checkin-test.py scrpt will really only run on Linux/Unix systems, using
+    # checkin-test.py script will really only run on Linux/Unix systems, using
     # 'cp -r' is not a testing portability problem.
 
   TEST_1

test/ci_support/CheckinTest_UnitTests.py

@@ -1628,7 +1628,7 @@ def checkin_test_run_case(testObject, testName, optionsStr, cmndInterceptsStr, \
       "--with-cmake=\""+g_withCmake+"\"",
       "--project-name=Trilinos",
       "--src-dir="+mockProjectBaseDir,
-      "--send-email-to=bogous@somewhere.com",
+      "--send-email-to=bogus@somewhere.com",
       "--project-configuration=%s" % os.path.join(g_testBaseDir,
         'CheckinTest_UnitTests_Config.py'),
       optionsStr,
@@ -1658,7 +1658,7 @@ def checkin_test_run_case(testObject, testName, optionsStr, cmndInterceptsStr, \
 
     if inPathGit:
       baseCmndInterceptsStr += \
-      "IT: git config --get user.email; 0; bogous@somewhere.com\n" \
+      "IT: git config --get user.email; 0; bogus@somewhere.com\n" \
       +"IT: which git; 0; /some/path/git\n"
 
     fullCmndInterceptsStr = baseCmndInterceptsStr + cmndInterceptsStr
@@ -2237,7 +2237,7 @@ def test_do_all_no_git_installed(self):
       +" --do-all --push" \
       ,
       \
-      "IT: git config --get user.email; 0; bogous@somewhere.com\n" \
+      "IT: git config --get user.email; 0; bogus@somewhere.com\n" \
       +"IT: which git; 1; '/usr/bin/which: no git in (path1:path2:path3)'\n" \
       ,
       \
@@ -5634,9 +5634,9 @@ def test_send_email_only_on_failure_do_all_mpi_debug_build_configure_fail(self):
       +g_expectedRegexBuildPasses \
       +g_expectedRegexTestPasses \
       +g_expectedCommonOptionsSummary \
-      +"Running: mailx -s .FAILED: Trilinos/MPI_DEBUG: configure failed. bogous@somewhere.com\n" \
+      +"Running: mailx -s .FAILED: Trilinos/MPI_DEBUG: configure failed. bogus@somewhere.com\n" \
       +"SERIAL_RELEASE: Skipping sending build/test case email because it passed and --send-email-only-on-failure was set!\n" \
-      +"Running: mailx -s .FAILED CONFIGURE/BUILD/TEST: Trilinos: .* bogous@somewhere.com\n" \
+      +"Running: mailx -s .FAILED CONFIGURE/BUILD/TEST: Trilinos: .* bogus@somewhere.com\n" \
       )
 
 

test/ci_support/CreateIssueTrackerFromCDashQuery_UnitTests.py

@@ -141,7 +141,7 @@ def test_t2_b2(self):
 
 Writing out new issue tracker text to 'newGitHubIssue.md'
 
-Writing out list of test/biuld pairs for CSV file 'newTestsWithIssueTrackers.csv'
+Writing out list of test/build pairs for CSV file 'newTestsWithIssueTrackers.csv'
 """
 
 g_example_t2_b2_github_issue = r"""

test/core/ExamplesUnitTests/TribitsExampleProject_Tests.cmake

@@ -826,7 +826,7 @@ tribits_add_advanced_test( TribitsExampleProject_install_perms
   #   ATDV-241).
   #
   # * Even with the source directory permissions being 'rwx------' (i.e. 700),
-  #   the files isntalled under share/WithSubpackagesB/stuff using
+  #   the files installed under share/WithSubpackagesB/stuff using
   #   install(DIRECTORY ... USE_SOURCE_PERMISSIONS) will actually have the
   #   correct group and other permissions set.
 
@@ -3122,7 +3122,7 @@ tribits_add_advanced_test( TribitsExampleProject_DisableWithSubpackagesB_EnableW
 
   TEST_0
     MESSAGE "Just do dependency analysis to test enabling of parent package"
-     " with eanbled subpackages even if is disabled"
+     " with enabled subpackages even if is disabled"
     CMND ${CMAKE_COMMAND}
     ARGS
       -DTribitsExProj_TRIBITS_DIR=${${PROJECT_NAME}_TRIBITS_DIR}

test/ctest_driver/MockCTestDriver/CMakeLists.txt

@@ -323,7 +323,7 @@ create_ctest_dependency_handling_test_case(
   EnableAll_EnableStokhos
   ARGS Trilinos_ADDITIONAL_PACKAGES=Stokhos
   PASS_REGULAR_EXPRESSION_ALL
-    "Enabling explicitly set package Stokhos which was default or otherwise disabed!"
+    "Enabling explicitly set package Stokhos which was default or otherwise disabled!"
     "Explicitly enabled top-level packages on input .*  Stokhos 1"
     "Explicitly disabled top-level packages on input .*  0"
     "Enabling all packages that are not currently disabled because of Trilinos_ENABLE_ALL_PACKAGES=ON"
@@ -906,7 +906,7 @@ if (Python3_EXECUTABLE)
       "Done with the all-at-once configure, build, test, and submit of Trilinos packages"
       "TRIBITS_CTEST_DRIVER: OVERALL: ALL PASSED"
     )
-  # NOTE: The above test is for the all-at-once appraoch that checks for the
+  # NOTE: The above test is for the all-at-once approach that checks for the
   # ALL_PACKAGES value in failedPackages.txt.  That value can be returned from
   # a configure failure in a previous all-at-once CI build.  This test makes
   # sure that all packages will get enabled in the follow-up CI iteration in
@@ -936,7 +936,7 @@ if (Python3_EXECUTABLE)
       "Done with the all-at-once configure, build, test, and submit of Trilinos packages"
       "TRIBITS_CTEST_DRIVER: OVERALL: ALL PASSED"
     )
-  # NOTE: The above test is for the all-at-once appraoch where
+  # NOTE: The above test is for the all-at-once approach where
   # <Project>_ENABLE_ALL_PACKAGES=ON is set (implicitly) but some packages are
   # disabled through setting <Project>_EXCLUDE_PACKAGES.  This makes sure that
   # these disables are passed into the inner configure.

test/ctest_driver/TribitsExampleProject/CMakeLists.txt

@@ -1300,7 +1300,7 @@ function(generate_aao_tests)
         "WithSubpackagesC_test_of_c_util [.]+ +Passed"
         "WithSubpackagesC_test_of_c_b_mixed_lang [.]+ +Passed"
         "WrapExternal_run_external_func [.]+ +Passed"
-        "Skipping converage tests because CTEST_DO_COVERAGE_TESTING='OFF'"
+        "Skipping coverage tests because CTEST_DO_COVERAGE_TESTING='OFF'"
         "Skipping memory testing because CTEST_DO_MEMORY_TESTING='FALSE'"
         "File '' does NOT exist so all tests passed"
         "TRIBITS_CTEST_DRIVER: OVERALL: ALL PASSED"
@@ -2151,7 +2151,7 @@ function(generate_aao_tests)
         "Building all targets"
         "Build PASSED"
         "Skipping tests because CTEST_DO_TEST='OFF'"
-        "Skipping converage tests because CTEST_DO_COVERAGE_TESTING='OFF'"
+        "Skipping coverage tests because CTEST_DO_COVERAGE_TESTING='OFF'"
         "Skipping memory testing because CTEST_DO_MEMORY_TESTING='FALSE'"
         "TRIBITS_CTEST_DRIVER: OVERALL: ALL PASSED"
       ALWAYS_FAIL_ON_NONZERO_RETURN
@@ -2189,7 +2189,7 @@ function(generate_aao_tests)
         "-- CTEST_CUSTOM_MAXIMUM_PASSED_TEST_OUTPUT_SIZE='54321'"
         "-- CTEST_CUSTOM_MAXIMUM_FAILED_TEST_OUTPUT_SIZE='123456'"
         "File '' does NOT exist so all tests passed"
-        "Skipping converage tests because CTEST_DO_COVERAGE_TESTING='OFF'"
+        "Skipping coverage tests because CTEST_DO_COVERAGE_TESTING='OFF'"
         "Skipping memory testing because CTEST_DO_MEMORY_TESTING='FALSE'"
         "TRIBITS_CTEST_DRIVER: OVERALL: ALL PASSED"
       ALWAYS_FAIL_ON_NONZERO_RETURN

tribits/CHANGELOG.md

@@ -14,7 +14,7 @@ ChangeLog for TriBITS
   when upgrading TriBITS.  (This change can be made automatically in all of
   the project's CMake files by running the script
   `tribits/refactoring/to-python3.sh <dir>`.)  However, backward compatibility
-  is provided for users confiugring TriBITS CMake projects which set `-D
+  is provided for users configuring TriBITS CMake projects which set `-D
   PYTHON_EXECUTABLE=<path>`.  In this case, if user sets `-D
   PYTHON_EXECUTABLE=<path>` in the cache, TriBITS will set that value `<path>`
   to the variable `Python3_EXECUTABLE` and avoid the call to
@@ -292,7 +292,7 @@ ChangeLog for TriBITS
   `<tplName>_LIB_ALL_DEPENDENCIES`.  Now `<tplName>_LIB_ENABLED_DEPENDENCIES`
   is automatically set from `<tplName>_LIB_ALL_DEPENDENCIES` based on what
   TPLs are actually enabled.  This avoids the problem described below from
-  directly setting `<tplName>_LIB_ENABLED_DEPENDENCIES` without reguard to
+  directly setting `<tplName>_LIB_ENABLED_DEPENDENCIES` without regard to
   what TPLs are actually enabled.  This maintains backward compatibility for
   existing configure scripts where an upstream TPL may not be enabled in some
   strange configure scripts (see
@@ -347,7 +347,7 @@ ChangeLog for TriBITS
   (in order to simplify internal TriBITS logic).  However, a side-effect of
   this change is that CMake code that was ifed out with an `if
   (${PACKAGE_NAME}_ENABLE_<depPkg>)` statement (because that variable was not
-  defined and therefore defaults to `FLASE`) for a required upstream
+  defined and therefore defaults to `FALSE`) for a required upstream
   dependency `<depPkg>` will now be enabled.  (This mistake can happen when an
   optional dependency `<depPkg>` is changed to a required dependency but the
   `if()` statements based on `${PACKAGE_NAME}_ENABLE_<depPkg>` are not

tribits/ci_support/CDashQueryAnalyzeReport.py

@@ -534,7 +534,7 @@ def assertExpectedNumColsFromCsvFile(csvFileName, dataRow, lineList,
     raise Exception(
       "Error, for CSV file '"+csvFileName+"' the data row"+\
       " "+str(dataRow)+" "+str(lineList)+" has"+\
-      " "+str(len(lineList))+" entries which does not macth"+\
+      " "+str(len(lineList))+" entries which does not match"+\
       " the number of column headers "+str(len(columnHeadersList))+"!")
 
 
@@ -1068,7 +1068,7 @@ def lookupDictGivenLookupDict(lookupDict, listOfKeys, listOfValues,
 # given a list key/value pairs to match
 #
 # Once created, this object acts like a list of dicts in most cases but also
-# contains functions to search for speicfic dicts given a set of key/value
+# contains functions to search for specific dicts given a set of key/value
 # pairs.
 #
 # Any modifications to the dicts looked up with this object will edit the

tribits/ci_support/CreateIssueTrackerFromCDashQuery.py

@@ -162,7 +162,7 @@ def writeNewIssueTrackerFile(self, issueTrackerText):
 
   def writeNewTestsWithIssueTrackersFile(self, uniqNonpassingTestsLOD):
     if self.options.newTestsWithIssueTrackersFile:
-      print("\nWriting out list of test/biuld pairs for CSV file '"\
+      print("\nWriting out list of test/build pairs for CSV file '"\
         +self.options.newTestsWithIssueTrackersFile+"'")
       csvFileStruct = CDQAR.writeTestsListOfDictsToCsvFileStructure(uniqNonpassingTestsLOD,
         self.issueTrackerUrlTemplate, self.issueTrackerTemplate )

tribits/ci_support/TribitsDumpDepsXmlScript.cmake

@@ -66,7 +66,7 @@ endif()
 # Execute the rest of the script now that everything has been asserted or found
 #
 
-# Get the TRIBITS_DIR (we can always find this easy since this scrit is in TriBITS)
+# Get the TRIBITS_DIR (we can always find this easy since this script is in TriBITS)
 get_filename_component( ${PROJECT_NAME}_TRIBITS_DIR  "${CMAKE_CURRENT_LIST_DIR}/.."  ABSOLUTE )
 message("-- Setting ${PROJECT_NAME}_TRIBITS_DIR=${${PROJECT_NAME}_TRIBITS_DIR}")
 

tribits/ci_support/TribitsPackageFilePathUtils.py

@@ -25,7 +25,7 @@
 #
 # In general, any file at the top level <projectDir>/ or under the
 # <projectDir>/cmake/ directory with the extension *.cmake is considered a
-# file that requires a global rebuild of all packaes.  However, there are a
+# file that requires a global rebuild of all packages.  However, there are a
 # few special files that we don't want to have to do a global rebuild for by
 # default.
 #

tribits/ci_support/cdash_build_testing_date.py

@@ -107,7 +107,7 @@ def getTimeZoneOffset(timeZoneStr):
 # Return a timezone aware datetime object given an input date and time given
 # in the format "<YYYY>-<MM>-<DD>T<hh>:<mm>:<ss> <TZ>".
 #
-# Note. the timzone <TZ> can be any of those supported by the function
+# Note. the timezone <TZ> can be any of those supported by the function
 # getTimeZoneOffset()
 def getBuildStartTimeUtcFromStr(buildStartTimeStr):
   buildStartTimeStrArray = buildStartTimeStr.split(" ")
@@ -156,7 +156,7 @@ def getDateOnlyFromDateTime(dateTime):
 #
 # buildStartTimeStr [in]: The 'buildstarttime' field string as returned from
 # CDash in the format "<YYYY>-<MM>-<DD>T<hh>:<mm>:<ss> <TZ>".  Note. the
-# timzone <TZ> can be any of those supported by the function
+# timezone <TZ> can be any of those supported by the function
 # getTimeZoneOffset()
 #
 # testingDayStartTimeUtcTD [in]: The testing day start time as the a timedelta

tribits/ci_support/is_checkin_tested_commit.py

@@ -94,7 +94,7 @@
   gitRef = "HEAD"
 
 #
-# B) Deterimine if the commit was tested and pushed with checkin-test.py
+# B) Determine if the commit was tested and pushed with checkin-test.py
 # script.
 #
 

tribits/core/config_tests/BLASMangling.cmake

@@ -22,7 +22,7 @@
 #    appended.
 #
 # BLAS_FUNC_DEFAULT
-#    The default mange mangling for Fortran functions
+#    The default mangling for Fortran functions
 #    that do not contain an underscore.
 #
 #  The Fortran 2003 name binding facilities and ISO_C_BINDING module

tribits/core/config_tests/FortranMangling.cmake

@@ -25,11 +25,11 @@ include(GlobalSet)
 #    appended.
 #
 # FC_FUNC_DEFAULT
-#    The default mange mangling for Fortran functions
+#    The default mangling for Fortran functions
 #    that do not contain an underscore.
 #
 # FC_FUNC__DEFAULT
-#    The default mange mangling for Fortran functions
+#    The default mangling for Fortran functions
 #    that do contain an underscore.
 #
 #  The Fortran 2003 name binding facilities and ISO_C_BINDING module

tribits/core/package_arch/TribitsAdjustPackageEnables.cmake

@@ -824,7 +824,7 @@ endmacro()
 # package ``<packageName>`` are set as EXTERNAL as well.  (We don't allow a
 # subset of subpackages in a parent package to be EXTERNAL and the other
 # subpackages to be INTERNAL.  That would be way too complicated to implement
-# and be way too confusing for implementors and users.)
+# and be way too confusing for implementers and users.)
 #
 macro(tribits_set_package_and_related_upstream_packages_to_external  packageName)
 

tribits/core/package_arch/TribitsProcessTplsLists.cmake

@@ -32,7 +32,7 @@ include(Split)
 #
 # This macro sets up a 2D array of ``NumTPLS`` by ``NumColumns`` listing out
 # the `TriBITS TPLs`_ for a `TriBITS Repository`_.  Each row (with 3 entries)
-# specifies a different TriBITS exernal package/TPL which contains the columns
+# specifies a different TriBITS external package/TPL which contains the columns
 # (ordered 0-2):
 #
 # 0. **TPL** (``<tpli_name>``): The name of the TriBITS external package/TPL

tribits/ctest_driver/README

@@ -302,7 +302,7 @@ dashboards.  You would do this with:
 E) Debugging problems:
 ======================
 
-Debugging the inner CTest dashbaords should be more straightforward as
+Debugging the inner CTest dashboards should be more straightforward as
 described in D.1 above.
 
 When first getting the outer <Project>Driver script to run, there can be

tribits/ctest_driver/TribitsCTestDriverCoreHelpers.cmake

@@ -269,7 +269,7 @@ macro(enable_package_if_not_explicitly_excluded  TRIBITS_PACKAGE)
     if (${TRIBITS_PACKAGE}_EXPLICITY_EXCLUDED)
       message("NOT enabling explicitly set package ${TRIBITS_PACKAGE} since it was explicitly excluded!")
     else()
-       message("Enabling explicitly set package ${TRIBITS_PACKAGE} which was default or otherwise disabed!")
+       message("Enabling explicitly set package ${TRIBITS_PACKAGE} which was default or otherwise disabled!")
       set(${PROJECT_NAME}_ENABLE_${TRIBITS_PACKAGE} ON)
     endif()
   else()
@@ -955,7 +955,7 @@ macro(tribits_ctest_package_by_package)
         set(PBP_CONFIGURE_PASSED TRUE)
         # load target properties and test keywords
         ctest_read_custom_files(BUILD "${CTEST_BINARY_DIRECTORY}")
-        # Overridde from this file!
+        # Override from this file!
         include("${TRIBITS_PROJECT_ROOT}/CTestConfig.cmake")
       else()
         message("\n${TRIBITS_PACKAGE} FAILED to configure!\n")
@@ -1384,7 +1384,7 @@ macro(tribits_ctest_all_at_once)
   # configure failed and the file CTestCustom.cmake does exist.  In this case,
   # CTest will just do nothing.
 
-  # Overridde any values by loading <projectDir>/CTestConfig.cmake
+  # Override any values by loading <projectDir>/CTestConfig.cmake
   include("${TRIBITS_PROJECT_ROOT}/CTestConfig.cmake")
 
   # Print out values read from project CTestCustom.cmake file
@@ -1531,7 +1531,7 @@ macro(tribits_ctest_all_at_once)
   if (NOT CTEST_DO_COVERAGE_TESTING)
 
     message("")
-    message("Skipping converage tests because CTEST_DO_COVERAGE_TESTING='${CTEST_DO_COVERAGE_TESTING}'!")
+    message("Skipping coverage tests because CTEST_DO_COVERAGE_TESTING='${CTEST_DO_COVERAGE_TESTING}'!")
     message("")
 
   elseif (NOT AAO_CONFIGURE_PASSED)

tribits/ctest_driver/experimental_build_test.cmake

@@ -34,7 +34,7 @@
 # There are a number of other options that you can change as
 # environment variables.  See the macros set_default_and_from_env(...)
 # in the file TribitsCTestDriverCore.cmake.  One option that you
-# might want to overridde, for instance is CTEST_BUILD_NAME so that
+# might want to override, for instance is CTEST_BUILD_NAME so that
 # you can insert a special name into the dashboard.
 #
 # When this script finishes running, the last package listed in