feat(option): binarize blood vessel label

torms3 · torms3 · commit 4cac78177a1e · 2024-01-18T12:17:29.000+09:00
diff --git a/deepem/train/option.py b/deepem/train/option.py
@@ -289,6 +289,9 @@ def parse(self):
             "soma",
         ]
 
+        if opt.blv_num_channels == 1:
+            requires_binarize.append("blood_vessel")
+
         # Test training
         if opt.test:
             opt.eval_intv = 100

Original file line number	Diff line number	Diff line change
`@@ -289,6 +289,9 @@ def parse(self):`
`289`	`289`	`"soma",`
`290`	`290`	`]`
`291`	`291`
	`292`	`+ if opt.blv_num_channels == 1:`
	`293`	`+ requires_binarize.append("blood_vessel")`
	`294`	`+`
`292`	`295`	`# Test training`
`293`	`296`	`if opt.test:`
`294`	`297`	`opt.eval_intv = 100`