pyproject.toml

[tool.poetry]
name = "afids-cnn"
version = "0.2.2"
description = ""
authors = ["Your Name <you@example.com>"]
readme = "README.md"
packages = [{include = "afids_cnn"}]

[tool.poetry.dependencies]
python = ">=3.8,<3.12"
numpy = ">=1.22,<1.24"
tensorflow = "^2.12.0"
keras = "^2.12.0"
torch = ">=1.13.1,<3.0.0"
snakebids = "^0.9.0"
scikit-image = "^0.19.3"
pandas = ">=1.3,<2"

[tool.poetry.group.dev.dependencies]
black = "^23.3.0"
ruff = "^0.0.267"
pyright = "^1.1.308"
pandas-stubs = "^2.0.1.230501"
snakefmt = "^0.8.4"
notebook = "^6.5.4"

[tool.poetry.scripts]
auto_afids_cnn_apply = 'afids_cnn.apply:main'
auto_afids_cnn_apply_bids = 'afids_cnn.apply_workflow.run:main'
auto_afids_cnn_train = 'afids_cnn.train:main'
auto_afids_cnn_train_bids = 'afids_cnn.train_workflow.run:main'

[tool.ruff]
select = ["ALL"]
ignore = ["ANN101", "ANN102", "TCH", "T20", "INP001", "S603", "EXE002"]
unfixable = ["F841"]
builtins = ["snakemake"]

[tool.pyright]
typeCheckingMode = "strict"
reportInconsistentConstructor = false
reportMissingParameterType = false
reportMissingTypeArgument = false
reportMissingTypeStubs = false
reportUnnecessaryTypeIgnoreComment = true
reportUnknownArgumentType = false
reportUnusedExpression = false
reportUnknownLambdaType = false
reportUnknownMemberType = false
reportUnknownParameterType = false
reportUnknownVariableType = false
reportUntypedBaseClass = false
reportUnusedVariable = false
reportPrivateUsage = false

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"