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what I did:
simulate_experiment_countmat(fasta = "~/doc/reference/fa/gencode.v32.transcripts.fa",
readmat = merges, outdir = "~/tmp/polyester/")
the error:
Error in h(simpleError(msg, call)) :
error in evaluating the argument 'i' in selecting a method for function 'extractROWS': invalid 'times' argument
does it mean this error happened because of the Fasta file is too big?
I tried a subset of the whole Fasta file with a corresponding readmat and the simulate function ran well.
thank you very much!
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