From 3632c6f9f836152d03ac9d939d560496a6702ceb Mon Sep 17 00:00:00 2001 From: Li Xing Date: Sat, 12 Oct 2024 16:51:20 +0800 Subject: [PATCH] Update run_pretrained_openfold.py use args.preset to check whether to use small bfd --- run_pretrained_openfold.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/run_pretrained_openfold.py b/run_pretrained_openfold.py index 510610493..9c46d5e1a 100644 --- a/run_pretrained_openfold.py +++ b/run_pretrained_openfold.py @@ -104,7 +104,7 @@ def precompute_alignments(tags, seqs, alignment_dir, args): uniclust30_database_path=args.uniclust30_database_path, uniprot_database_path=args.uniprot_database_path, template_searcher=template_searcher, - use_small_bfd=args.bfd_database_path is None, + use_small_bfd=args.preset=='reduced_dbs', no_cpus=args.cpus )