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Could peek subcommand list the type of every variants not just a summary text?
Besides, I installed the lastest version vt, but the peek shows no -o parameter:
$ ./vt --version
vt v0.57721
The MIT license
Copyright (c) 2013 Adrian Tan [email protected]
$ ./vt peek
undefined -- Required argument missing: <in.vcf>
peek v0.5
description : Summarizes the variants in a VCF file
usage : vt peek [options] <in.vcf>
options : -y output pdf file [summary.pdf]
-x output latex directory []
-f filter expression []
-I file containing list of intervals []
-i intervals []
-r reference sequence fasta file []
-? displays help
However, from the offical website, I could see that there is -o:
options : -o output VCF file [-]
-I file containing list of intervals []
-i intervals []
-r reference sequence fasta file []
-- ignores the rest of the labeled arguments following this flag
-h displays help
Did I miss something?
The text was updated successfully, but these errors were encountered:
Could peek subcommand list the type of every variants not just a summary text?
Besides, I installed the lastest version vt, but the peek shows no -o parameter:
However, from the offical website, I could see that there is -o:
Did I miss something?
The text was updated successfully, but these errors were encountered: