match on '<NON_REF>'

brentp · brentp · commit 1bf7c8f95c75 · 2018-08-01T09:17:01.000-06:00
see brentp/vcfanno#92
diff --git a/interfaces/interfaces.go b/interfaces/interfaces.go
@@ -184,6 +184,9 @@ func SameVariant(a, b IRefAlt) bool {
 			}
 		}
 	}
+	if a.Alt()[0] == "<NON_REF>" || b.Alt()[0] == "<NON_REF>" {
+		return true
+	}
 	return false
 }
 

Original file line number	Diff line number	Diff line change
`@@ -184,6 +184,9 @@ func SameVariant(a, b IRefAlt) bool {`
`184`	`184`	`}`
`185`	`185`	`}`
`186`	`186`	`}`
	`187`	`+ if a.Alt()[0] == "<NON_REF>" \|\| b.Alt()[0] == "<NON_REF>" {`
	`188`	`+ return true`
	`189`	`+ }`
`187`	`190`	`return false`
`188`	`191`	`}`
`189`	`192`