Currently the genome name is hardcoded: https://github.com/broadinstitute/scalable_analytics/blob/7de3671b7032620059b074692d07f0a9d161a2c4/data_loading/hdf5_to_sparse.py#L24 Instead add the genome name as a new column in the parameter file: https://github.com/broadinstitute/scalable_analytics/blob/7de3671b7032620059b074692d07f0a9d161a2c4/data_loading/hdf5_to_sparse_tasks.tsv#L1
Currently the genome name is hardcoded:
scalable_analytics/data_loading/hdf5_to_sparse.py
Line 24 in 7de3671
Instead add the genome name as a new column in the parameter file:
scalable_analytics/data_loading/hdf5_to_sparse_tasks.tsv
Line 1 in 7de3671