setup.py

from setuptools import setup

from pathlib import Path
this_directory = Path(__file__).parent
long_description = (this_directory / "README.md").read_text()

setup(
    name = "pylineaGT",
    version = "0.2.0",
    author = "Elena Buscaroli",
    author_email = "ele.buscaroli@gmail.com",
    description = "A Pyro model to perform lineage inference from Gene Therapy assays",
    long_description=long_description,
    long_description_content_type="text/markdown",
    license = "GPL-3.0",
    packages=["pylineaGT"],
    python_requires = ">=3.6",
    install_requires = [
        "pandas==1.3.3",
        "pyro-api==0.1.2",
        "pyro-ppl==1.8.0",
        "torch==1.11.0",
        "numpy==1.*",
        "scikit-learn==1.0.2",
    ]
)

# to build the package and publish it on Test-PyPI and PyPI:
# 1. python setup.py bdist_wheel
# 2. python -m twine upload --repository-url https://test.pypi.org/legacy/ dist/pylineaGT-X.X.X-py3-none-any.whl
# 3. python -m twine upload dist/pylineaGT-X.X.X-py3-none-any.whl