-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathontology_info.json
193 lines (193 loc) · 5.9 KB
/
ontology_info.json
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
{
"5.3.0": {
"ontologies": {
"CL": {
"version": "v2024-08-16",
"source": "https://github.com/obophenotype/cell-ontology/releases/download",
"filename": "cl.owl",
"cross_ontology_mapping": "cl.sssom.tsv"
},
"EFO": {
"version": "v3.74.0",
"source": "https://github.com/EBISPOT/efo/releases/download",
"filename": "efo.owl"
},
"HANCESTRO": {
"version": "3.0",
"source": "https://github.com/EBISPOT/hancestro/raw",
"filename": "hancestro.owl"
},
"HsapDv": {
"version": "v2024-05-28",
"source": "https://github.com/obophenotype/developmental-stage-ontologies/releases/download",
"filename": "hsapdv.owl"
},
"MONDO": {
"version": "v2024-08-06",
"source": "https://github.com/monarch-initiative/mondo/releases/download",
"filename": "mondo.owl"
},
"MmusDv": {
"version": "v2024-05-28",
"source": "https://github.com/obophenotype/developmental-stage-ontologies/releases/download",
"filename": "mmusdv.owl"
},
"NCBITaxon": {
"version": "v2023-06-20",
"source": "https://github.com/obophenotype/ncbitaxon/releases/download",
"filename": "ncbitaxon.owl.gz"
},
"UBERON": {
"version": "v2024-08-07",
"source": "https://github.com/obophenotype/uberon/releases/download",
"filename": "uberon.owl",
"cross_ontology_mapping": "uberon.sssom.tsv"
},
"PATO": {
"version": "v2023-05-18",
"source": "https://github.com/pato-ontology/pato/raw",
"filename": "pato.owl"
},
"FBbt": {
"version": "v2024-12-05",
"source": "https://github.com/FlyBase/drosophila-anatomy-developmental-ontology/releases/download",
"filename": "fbbt.owl",
"map_to": [
"CL",
"UBERON"
]
},
"FBdv": {
"version": "v2024-12-04",
"source": "https://github.com/FlyBase/drosophila-developmental-ontology/releases/download",
"filename": "fbdv.owl"
},
"ZFA": {
"version": "v2022-12-09",
"source": "https://github.com/ZFIN/zebrafish-anatomical-ontology/raw",
"filename": "zfa.owl",
"additional_ontologies": [
"ZFS"
],
"map_to": [
"CL",
"UBERON"
]
},
"WBls": {
"version": "vWS295",
"source": "https://github.com/obophenotype/c-elegans-development-ontology/raw/",
"filename": "wbls.owl"
},
"WBbt": {
"version": "v2024-09-24",
"source": "https://github.com/obophenotype/c-elegans-gross-anatomy-ontology/raw",
"filename": "wbbt.owl",
"map_to": [
"CL",
"UBERON"
]
}
}
},
"5.2.0": {
"ontologies": {
"CL": {
"version": "v2024-08-16",
"source": "https://github.com/obophenotype/cell-ontology/releases/download",
"filename": "cl.owl"
},
"EFO": {
"version": "v3.69.0",
"source": "https://github.com/EBISPOT/efo/releases/download",
"filename": "efo.owl"
},
"HANCESTRO": {
"version": "3.0",
"source": "https://github.com/EBISPOT/hancestro/raw",
"filename": "hancestro.owl"
},
"HsapDv": {
"version": "v2024-05-28",
"source": "https://github.com/obophenotype/developmental-stage-ontologies/releases/download",
"filename": "hsapdv.owl"
},
"MONDO": {
"version": "v2024-08-06",
"source": "https://github.com/monarch-initiative/mondo/releases/download",
"filename": "mondo.owl"
},
"MmusDv": {
"version": "v2024-05-28",
"source": "https://github.com/obophenotype/developmental-stage-ontologies/releases/download",
"filename": "mmusdv.owl"
},
"NCBITaxon": {
"version": "v2023-06-20",
"source": "https://github.com/obophenotype/ncbitaxon/releases/download",
"filename": "ncbitaxon.owl.gz"
},
"UBERON": {
"version": "v2024-08-07",
"source": "https://github.com/obophenotype/uberon/releases/download",
"filename": "uberon.owl"
},
"PATO": {
"version": "v2023-05-18",
"source": "https://github.com/pato-ontology/pato/raw",
"filename": "pato.owl"
}
},
"deprecated_on": "2024-11-13"
},
"5.1.0": {
"ontologies": {
"CL": {
"version": "v2024-04-05",
"source": "https://github.com/obophenotype/cell-ontology/releases/download",
"filename": "cl.owl"
},
"EFO": {
"version": "v3.65.0",
"source": "https://github.com/EBISPOT/efo/releases/download",
"filename": "efo.owl"
},
"HANCESTRO": {
"version": "3.0",
"source": "https://github.com/EBISPOT/hancestro/raw",
"filename": "hancestro.owl"
},
"HsapDv": {
"version": "11",
"source": "http://aber-owl.net/media/ontologies/HSAPDV",
"filename": "hsapdv.owl"
},
"MONDO": {
"version": "v2024-05-08",
"source": "https://github.com/monarch-initiative/mondo/releases/download",
"filename": "mondo.owl"
},
"MmusDv": {
"version": "9",
"source": "http://aber-owl.net/media/ontologies/MMUSDV",
"filename": "mmusdv.owl"
},
"NCBITaxon": {
"version": "v2023-06-20",
"source": "https://github.com/obophenotype/ncbitaxon/releases/download",
"filename": "ncbitaxon.owl.gz"
},
"UBERON": {
"version": "v2024-03-22",
"source": "https://github.com/obophenotype/uberon/releases/download",
"filename": "uberon.owl"
},
"PATO": {
"version": "v2023-05-18",
"source": "https://github.com/pato-ontology/pato/raw",
"filename": "pato.owl"
}
},
"deprecated_on": "2024-08-19"
}
}