cellxgene-schema CLI must validate Danio rerio

[brianraymor]

Context

Please see schema 5.3.0 for full requirements.

schema v5.3.0

• Required Ontologies
  • Added Zebrafish Anatomy Ontology (ZFA+ZFS) release 2022-12-09
• Required Gene Annotations
  • Added Danio rerio GRCz11 (GCA_000002035.4) Ensembl 113
• obs (Cell metadata)
  • Updated the ontology requirements for cell_type_ontology_term_id to include:
    • ZFA for Danio rerio
  • Updated the ontology requirements for development_stage_ontology_term_id to include:
    • ZFS for Danio rerio
  • Updated the requirements for organism_ontology_term_id to limit its values to a list of NCBITaxon terms
  • Updated the ontology requirements for tissue_ontology_term_id to include:
    • ZFA for Danio rerio
• var and raw.var (Gene Metadata)
  • Updated feature_reference to include:
    • Danio rerio