5.3 schema Contribute & Publish doc updates

[jahilton]

Updates to make/lines to edit:

• Data Eligibility: organisms
• Data Eligibility: Visium (non-HD) & Slide-seq
• Data Eligibility: multi-modal assays (pending timing of Census inclusion)
• Data Eligibility: add ATAC measurements
• obs: organism
• obs: dev_stage
• obs: sex
• obs: tissue
• obs: cell_type
• var: index is Ensembl ID (pending reference annotations used)
• Visium: 4992 observations

For multiple species:

Starting in H1 2025, CELLxGENE Discover will add support for additional organisms. Would you be willing to answer a few questions to help us with our planning?

1. What gene reference was used for your data? Why was this reference selected?
2. Are you currently using cell type, tissue, or development stage ontologies for metadata? If so, which ontologies?
3. For livestock cases - Are you aware of Functional Annotation of ANimal Genomes (FAANG)? If so, do you follow their rule sets (example)?

List will finalize once the schema is set