-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathasync_mlp.cpp
More file actions
262 lines (224 loc) · 12.1 KB
/
Copy pathasync_mlp.cpp
File metadata and controls
262 lines (224 loc) · 12.1 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
#include <cblas.h>
#include <mpi.h>
#include "common.hpp"
#include "activations.h"
#include "data.hpp"
#include <upcxx/upcxx.hpp>
#include <algorithm>
/*
class async_mlp
{
public:
int num_layers;
int *layer_sizes;
double** weights;
double** biases;
fun_t *activations;
fun_t *d_activations;
double **layers;
double **deltas;
async_mlp(int arg_num_layers, int *arg_layers, fun_t *activations, fun_t *d_activations)
{
num_layers = arg_num_layers;
layer_sizes = (int *)malloc(num_layers * sizeof(int));
weights = (double **)malloc((num_layers - 1) * sizeof(double *));
biases = (double **)malloc((num_layers - 1) * sizeof(double *));
activations = activations;
d_activations = d_activations;
layers = (double **)malloc(num_layers * sizeof(double *));
deltas = (double **)malloc(num_layers * sizeof(double *));
for (int i = 0; i < num_layers; i++)
{
layer_sizes[i] = arg_layers[i];
if (i < num_layers - 1)
{
weights[i] = rand_vector(arg_layers[i + 1] * arg_layers[i]);
biases[i] = rand_vector(arg_layers[i + 1]);
}
layers[i] = (double *)malloc(arg_layers[i] * sizeof(double));
deltas[i] = (double *)malloc(arg_layers[i] * sizeof(double));
}
}
void mlp_forward(double *x)
{
//// std::cerr << "copying" << std::endl;
cblas_dcopy(layer_sizes[0], x, 1, layers[0], 1);
for (int i = 0; i < num_layers - 1; i++)
{
std::cerr << "dgemv" << std::endl;
// h_{i + 1} = W_{h_i} h_{i}
cblas_dgemv(CblasRowMajor, CblasNoTrans, layer_sizes[i + 1], layer_sizes[i], 1.0, weights[i], layer_sizes[i], layers[i], 1, 0.0, layers[i + 1], 1);
// h_{i + 1} += b_{i}
std::cerr << "daxpy" << std::endl;
cblas_daxpy(layer_sizes[i + 1], 1.0, biases[i], 1, layers[i + 1], 1);
// h_{i + 1} = sigmoid(h_{i + 1})
std::cerr << "transform" << std::endl;
//std::transform(mlp->layers[i + 1], mlp->layers[i + 1] + mlp->layer_sizes[i + 1], mlp->layers[i + 1], mlp->activations[i])
std::transform(layers[i + 1], layers[i + 1] + layer_sizes[i + 1], layers[i + 1], activations[i]);
std::cerr << "finish transform" << std::endl;
}
}
void mlp_gradient(double* w_update, double* b_update, int lyr) {
std::transform(layers[lyr + 1], layers[lyr + 1] + layer_sizes[lyr + 1], layers[lyr + 1], d_activations[lyr]);
// delta_{i + 1} = delta_{i + 1} * d_activation(h_{i + 1})
hadamard_product(deltas[lyr + 1], layers[lyr + 1], deltas[lyr + 1], layer_sizes[lyr + 1]);
//cblas_dger(CblasRowMajor, layer_sizes[i + 1], layer_sizes[i], -1.0 * alpha, deltas[i + 1], 1, layers[i], 1, weights[i], layer_sizes[i]);
cblas_dger(CblasRowMajor, layer_sizes[lyr + 1], layer_sizes[lyr], 1.0, deltas[lyr + 1], 1, layers[lyr], 1, w_update, layer_sizes[lyr]);
cblas_dcopy(layer_sizes[lyr + 1], deltas[lyr + 1], 1, b_update, 1);
}
void mlp_update_weights(double alpha, const double* w_update, const double* b_update, int lyr) {
// W_i -= alpha * delta_{i + 1} h_i^T
cblas_daxpy(layer_sizes[lyr + 1] * layer_sizes[lyr], -1.0 * alpha, w_update, 1, weights[lyr], 1);
// b_i -= alpha * delta_{i + 1}
cblas_daxpy(layer_sizes[lyr + 1], -1.0 * alpha, b_update, 1, biases[lyr], 1);
// delta_{i} = W_i^T delta_{i + 1}
cblas_dgemv(CblasRowMajor, CblasTrans, layer_sizes[lyr + 1], layer_sizes[lyr], 1.0, weights[lyr], layer_sizes[lyr], deltas[lyr + 1], 1, 0.0, deltas[lyr], 1);
}
};
*/
void mlp_forward(mlp_t *mlp, double *x)
{
cblas_dcopy(mlp->layer_sizes[0], x, 1, mlp->layers[0], 1);
for (int i = 0; i < mlp->num_layers - 1; i++)
{
// h_{i + 1} = W_{h_i} h_{i}
cblas_dgemv(CblasRowMajor, CblasNoTrans, mlp->layer_sizes[i + 1], mlp->layer_sizes[i], 1.0, mlp->weights[i], mlp->layer_sizes[i], mlp->layers[i], 1, 0.0, mlp->layers[i + 1], 1);
// h_{i + 1} += b_{i}
cblas_daxpy(mlp->layer_sizes[i + 1], 1.0, mlp->biases[i], 1, mlp->layers[i + 1], 1);
// h_{i + 1} = sigmoid(h_{i + 1})
std::transform(mlp->layers[i + 1], mlp->layers[i + 1] + mlp->layer_sizes[i + 1], mlp->layers[i + 1], mlp->activations[i]);
}
}
void mlp_gradient(mlp_t *mlp, double* w_update, double* b_update, int lyr) {
// We overwrite our previous output with the derivative of activation applied to it
std::transform(mlp->layers[lyr + 1], mlp->layers[lyr + 1] + mlp->layer_sizes[lyr + 1], mlp->layers[lyr + 1], mlp->d_activations[lyr]);
// delta_{i + 1} = delta_{i + 1} * d_activation(h_{i + 1})
hadamard_product(mlp->deltas[lyr + 1], mlp->layers[lyr + 1], mlp->deltas[lyr + 1], mlp->layer_sizes[lyr + 1]);
//cblas_dger(CblasRowMajor, mlp->layer_sizes[i + 1], mlp->layer_sizes[i], -1.0 * alpha, mlp->deltas[i + 1], 1, mlp->layers[i], 1, mlp->weights[i], mlp->layer_sizes[i]);
cblas_dger(CblasRowMajor, mlp->layer_sizes[lyr + 1], mlp->layer_sizes[lyr], 1.0, mlp->deltas[lyr + 1], 1, mlp->layers[lyr], 1, w_update, mlp->layer_sizes[lyr]);
cblas_dcopy(mlp->layer_sizes[lyr + 1], mlp->deltas[lyr + 1], 1, b_update, 1);
}
void mlp_update_weights(mlp_t *mlp, double alpha, double* w_update, double* b_update, int lyr) {
// W_i -= alpha * delta_{i + 1} h_i^T
//cblas_dger(CblasRowMajor, mlp->layer_sizes[lyr + 1], mlp->layer_sizes[lyr], -1.0 * alpha, mlp->deltas[lyr + 1], 1, mlp->layers[lyr], 1, mlp->weights[lyr], mlp->layer_sizes[lyr]);
cblas_daxpy(mlp->layer_sizes[lyr + 1]* mlp->layer_sizes[lyr], -1.0 * alpha, w_update, 1, mlp->weights[lyr], 1);
// b_i -= alpha * delta_{i + 1}
//cblas_daxpy(mlp->layer_sizes[lyr + 1], -1.0 * alpha, mlp->deltas[lyr + 1], 1, mlp->biases[lyr], 1);
cblas_daxpy(mlp->layer_sizes[lyr + 1], -1.0 * alpha, b_update, 1, mlp->biases[lyr], 1);
// delta_{i} = W_i^T delta_{i + 1}
cblas_dgemv(CblasRowMajor, CblasTrans, mlp->layer_sizes[lyr + 1], mlp->layer_sizes[lyr], 1.0, mlp->weights[lyr], mlp->layer_sizes[lyr], mlp->deltas[lyr + 1], 1, 0.0, mlp->deltas[lyr], 1);
//cblas_dgemv(CblasRowMajor, CblasTrans, mlp->layer_sizes[lyr + 1], mlp->layer_sizes[lyr], 1.0, mlp->weights[lyr], mlp->layer_sizes[lyr], b_update, 1, 0.0, mlp->deltas[lyr], 1);
}
using grad_stack_t = upcxx::dist_object<upcxx::global_ptr<double>>;
int main() {
upcxx::init();
int num_layers = 5;
int layers[] = {1, 8, 8, 8, 1};
fun_t activations[] = {relu, relu, relu, identity};
fun_t d_activations[] = {d_relu, d_relu, d_relu, d_identity};
mlp_t *mlp = create_mlp(num_layers, layers, activations, d_activations);
double *x = new double[NUM_SAMPLES / upcxx::rank_n()];
double *y = new double[NUM_SAMPLES / upcxx::rank_n()];
read_data(x, y, NUM_SAMPLES / upcxx::rank_n());
double seconds = 0.0;
std::vector<grad_stack_t> p_wgrads;
p_wgrads.resize(mlp->num_layers - 1);
std::vector<grad_stack_t> p_bgrads;
p_bgrads.resize(mlp->num_layers - 1);
std::vector<double *> all_ws;
all_ws.resize(mlp->num_layers - 1);
std::vector<double *> all_bs;
all_bs.resize(mlp->num_layers - 1);
// std::cerr << "init" << std::endl;
/*for (int lyr = mlp->num_layers - 2; lyr >= 0; lyr--) {
int w_size = mlp->layer_sizes[lyr + 1] * mlp->layer_sizes[lyr] * (std::rank_n() - 1);
ws[lyr] = new double[w_size];//(double*) realloc(w_update, w_size * sizeof(double));
int b_size = mlp->layer_sizes[lyr + 1];
bs[lyr] = new double[b_size]; //(double*) realloc(b_update, b_size * sizeof(double));
}*/
for (int lyr = 0; lyr <= mlp->num_layers - 2; lyr++) {
int w_size = mlp->layer_sizes[lyr + 1] * mlp->layer_sizes[lyr] * (upcxx::rank_n() - 1);
p_wgrads[lyr] = grad_stack_t(upcxx::new_array<double>(w_size));
all_ws[lyr] = new double[w_size];
int b_size = mlp->layer_sizes[lyr + 1] * (upcxx::rank_n() - 1);
all_bs[lyr] = new double[b_size];
p_bgrads[lyr] = grad_stack_t(upcxx::new_array<double>(b_size));
}
// std::cerr << "finished creating pgrads" << std::endl;
upcxx::dist_object<upcxx::global_ptr<uint64_t>> ptr(upcxx::new_<uint64_t>(0));
upcxx::atomic_domain<uint64_t> ad = upcxx::atomic_domain<uint64_t>({upcxx::atomic_op::fetch_add});;
// std::cerr << "finished that" << std::endl;
for (int i = 0; i < NUM_SAMPLES / upcxx::rank_n(); i++)
{
if (upcxx::rank_me() > 0) {
mlp_forward(mlp, &x[i]);
}
// std::cerr << "passed forward" << std::endl;
upcxx::barrier();
auto start_time = std::chrono::steady_clock::now();
if (upcxx::rank_me() > 0) {
int output_index = mlp->num_layers - 1;
// delta_o = y_hat
cblas_dcopy(mlp->layer_sizes[output_index], mlp->layers[output_index], 1, mlp->deltas[output_index], 1);
// delta_o -= y
cblas_daxpy(mlp->layer_sizes[output_index], -1.0, &y[i], 1, mlp->deltas[output_index], 1);
}
//std::cerr << "passed initial setup" << std::endl;
for (int lyr = mlp->num_layers - 2; lyr >= 0; lyr--) {
int w_size = mlp->layer_sizes[lyr + 1] * mlp->layer_sizes[lyr];
double* w_update = all_ws[lyr];
int b_size = mlp->layer_sizes[lyr + 1];
double* b_update = all_bs[lyr];
// std::cerr << "initializating w and b" << std::endl;
std::fill_n(w_update, w_size, 0.0);
std::fill_n(b_update, b_size, 0.0);
// std::cerr << "Starting Gradient" << std::endl;
upcxx::promise<> prom;
if (upcxx::rank_me() > 0) {
mlp_gradient(mlp, w_update, b_update, lyr);
auto idx = ad.fetch_add(ptr.fetch(0).wait(), 1, std::memory_order_relaxed).wait();
// std::cerr << "Got Index " << idx << std::endl;
auto w_addr = p_wgrads[lyr].fetch(0).wait();
upcxx::rput(w_update, w_addr + idx * w_size, w_size, upcxx::operation_cx::as_promise(prom));
// std::cerr << "Sent First Rput" << std::endl;
auto b_addr = p_bgrads[lyr].fetch(0).wait();
upcxx::rput(b_update, b_addr + idx * b_size, b_size, upcxx::operation_cx::as_promise(prom));
// std::cerr << "Finished Rput" << std::endl;
}
prom.finalize().wait();
upcxx::barrier();
if (upcxx::rank_me() == 0) {
// std::cerr << "Dereferencing p grads" << std::endl;
double* w_grads = p_wgrads[lyr]->local();
double* b_grads = p_bgrads[lyr]->local();
for (uint64_t p = 1; p < upcxx::rank_n(); p++) {
cblas_daxpy(w_size, 1.0, w_grads + (p-1) * w_size, 1, w_update, 1);
cblas_daxpy(b_size, 1.0, b_grads + (p-1) * b_size, 1, b_update, 1);
}
cblas_dscal(w_size, 1.0/(upcxx::rank_n() - 1), w_update, 1);
cblas_dscal(b_size, 1.0/(upcxx::rank_n() - 1), b_update, 1);
std::copy(w_grads, w_grads + w_size, w_update);
std::copy(b_grads, b_grads + b_size, b_update);
// std::cerr << "setting pointer to 0" << std::endl;
*(ptr->local()) = 0;
}
if (upcxx::rank_me() > 0) {
// std::cerr << "doing rgets" << std::endl;
auto fut_w = rget(p_wgrads[lyr].fetch(0).wait(), w_update, w_size);
auto fut_b = rget(p_bgrads[lyr].fetch(0).wait(), b_update, b_size);
// std::cerr << "finished rgets" << std::endl;
fut_w.wait();
fut_b.wait();
mlp_update_weights(mlp, 0.0001, w_update, b_update, lyr);
}
}
auto end_time = std::chrono::steady_clock::now();
std::chrono::duration<double> diff = end_time - start_time;
seconds += diff.count();
}
if (upcxx::rank_me() == 0)
std::cerr << "Async training took " << seconds << " seconds for " << upcxx::rank_n() << " processes." << std::endl;
delete_mlp(mlp);
upcxx::finalize();
return 0;
}