information

INFORMATION

Overview

Information theory analysis module for METAINFORMANT.

Contents

• integration/ — Cross-module information integration
• metrics/ — Information metrics (core/, advanced/, analysis/ subpackages)
• network_info/ — Network information analysis
• workflow/ — Information theory workflows

Structure

graph TD
    subgraph "Information Module"
        MC[metrics/core/] --> |syntactic.py| SH[Shannon Entropy, MI, KL]
        MC --> |continuous.py| DE[Differential Entropy]
        MC --> |estimation.py| EST[Estimators]

        MA[metrics/advanced/] --> |geometry.py| FG[Fisher-Rao, Hellinger]
        MA --> |channel.py| CH[Channel Capacity]
        MA --> |decomposition.py| DC[PID, Synergy]
        MA --> |semantic.py| SEM[Semantic Similarity]

        MN[metrics/analysis/] --> |analysis.py| PRO[Information Profiles]

        NI[network_info/] --> |information_flow.py| TF[Transfer Entropy, Granger]

        INT[integration/] --> |integration.py| BI[Cross-Omic Integration]

        WF[workflow/] --> |workflows.py| BAT[Batch Pipelines]
    end

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Usage

Import module:

from metainformant.information import ...