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external potentials and bonds #2

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dprovasi opened this issue May 17, 2017 · 1 comment
Open

external potentials and bonds #2

dprovasi opened this issue May 17, 2017 · 1 comment

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@dprovasi
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add simple external potentials and bonds
right now, the particle has a step method: the trajectory step method calls the step for each particle, but this is the same for all particle types
how can we have particle types that include harmonic bonds to other particles?
@dprovasi
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particle has energy contributions
part = particle(ptype, pos, age, id)
part.add_energy( bond(k,d,particle2) )

reactions can break and form bonds?

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@dprovasi