diff --git a/packages/react-native/Libraries/Alert/RCTAlertManager.android.js b/packages/react-native/Libraries/Alert/RCTAlertManager.android.js
index 7b482808a3a3..67c7888e0f31 100644
--- a/packages/react-native/Libraries/Alert/RCTAlertManager.android.js
+++ b/packages/react-native/Libraries/Alert/RCTAlertManager.android.js
@@ -14,12 +14,25 @@ import NativeDialogManagerAndroid from '../NativeModules/specs/NativeDialogManag
 
 function emptyCallback() {}
 
+/**
+ * Shows an alert dialog on Android using the native DialogManagerAndroid module.
+ * Falls back gracefully if the native module is not available.
+ *
+ * @param {Args} args - The alert configuration (title, message, buttons, etc.)
+ * @param {Function} callback - Callback function invoked with (id, value) when user selects an option
+ * @returns {void}
+ * @note NativeDialogManagerAndroid provides better Android-specific UI/UX than the
+ * standard AlertManager. If unavailable, the alert silently fails to prevent crashes.
+ * See TODO(5998984) for improved polyfill implementation.
+ */
 export function alertWithArgs(
   args: Args,
   callback: (id: number, value: string) => void,
 ) {
-  // TODO(5998984): Polyfill it correctly with DialogManagerAndroid
   if (!NativeDialogManagerAndroid) {
+    console.warn(
+      'NativeDialogManagerAndroid is not available. Alert may not be displayed.',
+    );
     return;
   }
 
diff --git a/packages/react-native/Libraries/LayoutAnimation/LayoutAnimation.js b/packages/react-native/Libraries/LayoutAnimation/LayoutAnimation.js
index 0541357195db..225e233c0ddd 100644
--- a/packages/react-native/Libraries/LayoutAnimation/LayoutAnimation.js
+++ b/packages/react-native/Libraries/LayoutAnimation/LayoutAnimation.js
@@ -45,8 +45,15 @@ type OnAnimationDidFailCallback = () => void;
 let isLayoutAnimationEnabled: boolean =
   ReactNativeFeatureFlags.isLayoutAnimationEnabled();
 
+/**
+ * Internal function to enable or disable layout animations.
+ * When disabled, configureNext calls will be no-ops.
+ *
+ * @param {boolean} value - Whether to enable layout animations
+ * @internal
+ */
 function setLayoutAnimationEnabled(value: boolean) {
-  isLayoutAnimationEnabled = isLayoutAnimationEnabled;
+  isLayoutAnimationEnabled = value;
 }
 
 /**
diff --git a/packages/react-native/Libraries/Utilities/FeatureDetection.js b/packages/react-native/Libraries/Utilities/FeatureDetection.js
index 83cdd80ac4e1..4f693b9ca784 100644
--- a/packages/react-native/Libraries/Utilities/FeatureDetection.js
+++ b/packages/react-native/Libraries/Utilities/FeatureDetection.js
@@ -9,19 +9,25 @@
  */
 
 /**
- * @return whether or not a @param {function} f is provided natively by calling
- * `toString` and check if the result includes `[native code]` in it.
+ * Detects if a function is a native function (not a polyfill or user-defined).
  *
- * Note that a polyfill can technically fake this behavior but few does it.
- * Therefore, this is usually good enough for our purpose.
+ * Checks if the function's toString representation includes `[native code]`.
+ * Note: A polyfill can technically fake this, but most don't, making this
+ * check reliable for practical purposes.
+ *
+ * @param {Function} f - Function to check
+ * @returns {boolean} True if the function is a native function
  */
 export function isNativeFunction(f: Function): boolean {
   return typeof f === 'function' && f.toString().indexOf('[native code]') > -1;
 }
 
 /**
- * @return whether or not the constructor of @param {object} o is an native
- * function named with @param {string} expectedName.
+ * Checks if an object's constructor is a native function with a specific name.
+ *
+ * @param {Object} o - Object to check
+ * @param {string} expectedName - Expected constructor name
+ * @returns {boolean} True if the constructor is native and matches the expected name
  */
 export function hasNativeConstructor(o: Object, expectedName: string): boolean {
   const con = Object.getPrototypeOf(o).constructor;
diff --git a/packages/react-native/Libraries/Utilities/RCTLog.js b/packages/react-native/Libraries/Utilities/RCTLog.js
index 8692aa979184..d20bf7b6e83d 100644
--- a/packages/react-native/Libraries/Utilities/RCTLog.js
+++ b/packages/react-native/Libraries/Utilities/RCTLog.js
@@ -23,7 +23,13 @@ const levelsMap = {
 let warningHandler: ?(...Array<unknown>) => void = null;
 
 const RCTLog = {
-  // level one of log, info, warn, error, mustfix
+  /**
+   * Logs to console only if the native logging hook is unavailable.
+   * If available, delegates to native logging and reports warnings to LogBox.
+   *
+   * @param {string} level - Log level: 'log', 'info', 'warn', 'error', or 'fatal'
+   * @param {...any} args - Arguments to log
+   */
   logIfNoNativeHook(level: string, ...args: Array<unknown>): void {
     // We already printed in the native console, so only log here if using a js debugger
     if (typeof global.nativeLoggingHook === 'undefined') {
@@ -36,7 +42,14 @@ const RCTLog = {
     }
   },
 
-  // Log to console regardless of nativeLoggingHook
+  /**
+   * Logs to console regardless of native logging hook availability.
+   * Throws an invariant if the log level is invalid.
+   *
+   * @param {string} level - Log level: 'log', 'info', 'warn', 'error', or 'fatal'
+   * @param {...any} args - Arguments to log
+   * @throws Invariant error if level is not a valid log level
+   */
   logToConsole(level: string, ...args: Array<unknown>): void {
     // $FlowFixMe[invalid-computed-prop]
     const logFn = levelsMap[level];
@@ -48,6 +61,11 @@ const RCTLog = {
     console[logFn](...args);
   },
 
+  /**
+   * Sets a custom warning handler to process warnings reported to LogBox.
+   *
+   * @param {?Function} handler - Function to handle warnings, or null to remove the handler
+   */
   setWarningHandler(handler: typeof warningHandler): void {
     warningHandler = handler;
   },
diff --git a/packages/react-native/Libraries/Utilities/SceneTracker.js b/packages/react-native/Libraries/Utilities/SceneTracker.js
index 2cedf5df6f07..4fcdba0845c4 100644
--- a/packages/react-native/Libraries/Utilities/SceneTracker.js
+++ b/packages/react-native/Libraries/Utilities/SceneTracker.js
@@ -16,16 +16,33 @@ let _listeners: Array<(scene: Scene) => void> = [];
 
 let _activeScene: Scene = {name: 'default'};
 
+/**
+ * Global scene tracker for managing the currently active scene in the application.
+ * Notifies listeners whenever the active scene changes.
+ */
 const SceneTracker = {
+  /**
+   * Sets the currently active scene and notifies all registered listeners.
+   * @param {Scene} scene - The new active scene object
+   */
   setActiveScene(scene: Scene) {
     _activeScene = scene;
     _listeners.forEach(listener => listener(_activeScene));
   },
 
+  /**
+   * Gets the currently active scene.
+   * @returns {Scene} The active scene object
+   */
   getActiveScene(): Scene {
     return _activeScene;
   },
 
+  /**
+   * Registers a listener to be called whenever the active scene changes.
+   * @param {Function} callback - Function called with the new scene when it changes
+   * @returns {Object} Object with a remove() method to unsubscribe
+   */
   addActiveSceneChangedListener(callback: (scene: Scene) => void): {
     remove: () => void,
     ...
diff --git a/packages/react-native/Libraries/Utilities/differ/deepDiffer.js b/packages/react-native/Libraries/Utilities/differ/deepDiffer.js
index 0f5d48cc7270..0b1d3dff72b9 100644
--- a/packages/react-native/Libraries/Utilities/differ/deepDiffer.js
+++ b/packages/react-native/Libraries/Utilities/differ/deepDiffer.js
@@ -25,8 +25,18 @@ function unstable_setLogListeners(listeners: ?LogListeners) {
   logListeners = listeners;
 }
 
-/*
- * @returns {bool} true if different, false if equal
+/**
+ * Deep equality comparison that recursively checks all properties.
+ * 
+ * Returns true if values differ, false if equal. Handles primitives, objects,
+ * arrays, and mixed types. Functions are considered equal by default unless
+ * unsafelyIgnoreFunctions is set to false.
+ *
+ * @param {any} one - First value
+ * @param {any} two - Second value
+ * @param {Options|number} maxDepthOrOptions - Max recursion depth or options
+ * @param {Options} maybeOptions - Options when first is number
+ * @returns {boolean} True if different, false if equal
  */
 function deepDiffer(
   one: any,
diff --git a/packages/react-native/Libraries/Utilities/differ/insetsDiffer.js b/packages/react-native/Libraries/Utilities/differ/insetsDiffer.js
index 0742df32c31e..2d574caae718 100644
--- a/packages/react-native/Libraries/Utilities/differ/insetsDiffer.js
+++ b/packages/react-native/Libraries/Utilities/differ/insetsDiffer.js
@@ -25,6 +25,15 @@ const dummyInsets = {
   bottom: undefined,
 };
 
+/**
+ * Compares two inset objects for equality.
+ * Returns true if the insets are different, false if equal.
+ *
+ * @param {Inset} one - First inset object (top, left, right, bottom)
+ * @param {Inset} two - Second inset object
+ * @returns {boolean} True if insets differ, false if equal
+ * @performance O(1) - Compares only four numeric values
+ */
 function insetsDiffer(one: Inset, two: Inset): boolean {
   one = one || dummyInsets;
   two = two || dummyInsets;
diff --git a/packages/react-native/Libraries/Utilities/differ/matricesDiffer.js b/packages/react-native/Libraries/Utilities/differ/matricesDiffer.js
index 58bc686d884d..a1958e10adc3 100644
--- a/packages/react-native/Libraries/Utilities/differ/matricesDiffer.js
+++ b/packages/react-native/Libraries/Utilities/differ/matricesDiffer.js
@@ -11,13 +11,17 @@
 'use strict';
 
 /**
- * Unrolls an array comparison specially for matrices. Prioritizes
- * checking of indices that are most likely to change so that the comparison
- * bails as early as possible.
+ * Unrolls an array comparison specially for matrices (4x4 transformation matrices).
  *
- * @param {MatrixMath.Matrix} one First matrix.
- * @param {MatrixMath.Matrix} two Second matrix.
- * @return {boolean} Whether or not the two matrices differ.
+ * Prioritizes checking of indices that are most likely to change so that the
+ * comparison bails as early as possible. This optimizes for common transformations.
+ * 
+ * Index check order: [12,13,14,5,10,0,1,2,3,4,6,7,8,9,11,15]
+ *
+ * @param {?Array<number>} one - First matrix (16 elements)
+ * @param {?Array<number>} two - Second matrix (16 elements)
+ * @returns {boolean} True if matrices differ, false if equal
+ * @performance O(1) - Fixed size comparison, early exit on first difference
  */
 function matricesDiffer(one: ?Array<number>, two: ?Array<number>): boolean {
   if (one === two) {
diff --git a/packages/react-native/Libraries/Utilities/differ/pointsDiffer.js b/packages/react-native/Libraries/Utilities/differ/pointsDiffer.js
index 9bf891f914e2..06a749dd9dee 100644
--- a/packages/react-native/Libraries/Utilities/differ/pointsDiffer.js
+++ b/packages/react-native/Libraries/Utilities/differ/pointsDiffer.js
@@ -18,6 +18,15 @@ type Point = {
 
 const dummyPoint: Point = {x: undefined, y: undefined};
 
+/**
+ * Compares two point objects for equality.
+ * Returns true if the points are different, false if equal.
+ *
+ * @param {?Point} one - First point object with x, y coordinates
+ * @param {?Point} two - Second point object with x, y coordinates
+ * @returns {boolean} True if points differ, false if equal
+ * @performance O(1) - Compares only two numeric values
+ */
 function pointsDiffer(one: ?Point, two: ?Point): boolean {
   one = one || dummyPoint;
   two = two || dummyPoint;
diff --git a/packages/react-native/Libraries/Utilities/differ/sizesDiffer.js b/packages/react-native/Libraries/Utilities/differ/sizesDiffer.js
index cce188c38d43..b0e7e37091be 100644
--- a/packages/react-native/Libraries/Utilities/differ/sizesDiffer.js
+++ b/packages/react-native/Libraries/Utilities/differ/sizesDiffer.js
@@ -13,6 +13,15 @@
 const dummySize = {width: undefined, height: undefined};
 type Size = {width: ?number, height: ?number};
 
+/**
+ * Compares two size objects for equality.
+ * Returns true if the sizes are different, false if equal.
+ *
+ * @param {Size} one - First size object with width, height
+ * @param {Size} two - Second size object with width, height
+ * @returns {boolean} True if sizes differ, false if equal
+ * @performance O(1) - Compares only two numeric values
+ */
 function sizesDiffer(one: Size, two: Size): boolean {
   const defaultedOne = one || dummySize;
   const defaultedTwo = two || dummySize;
diff --git a/packages/react-native/Libraries/Utilities/dismissKeyboard.js b/packages/react-native/Libraries/Utilities/dismissKeyboard.js
index 8b1017fa60ef..d5d9db157fce 100644
--- a/packages/react-native/Libraries/Utilities/dismissKeyboard.js
+++ b/packages/react-native/Libraries/Utilities/dismissKeyboard.js
@@ -8,13 +8,24 @@
  * @format
  */
 
-// This function dismisses the currently-open keyboard, if any.
-
 'use strict';
 
 const TextInputState =
   require('../Components/TextInput/TextInputState').default;
 
+/**
+ * Programmatically dismisses the currently-open keyboard on the device.
+ *
+ * This function finds the currently focused text input and blurs it, which triggers
+ * the keyboard dismissal on iOS and Android.
+ *
+ * @example
+ *   import { dismissKeyboard } from 'react-native';
+ *   dismissKeyboard(); // Hide the keyboard
+ *
+ * @returns {void}
+ * @note This is a no-op if no text input is currently focused.
+ */
 function dismissKeyboard() {
   TextInputState.blurTextInput(TextInputState.currentlyFocusedInput());
 }
diff --git a/packages/react-native/Libraries/Utilities/mapWithSeparator.js b/packages/react-native/Libraries/Utilities/mapWithSeparator.js
index 23fe48a006c5..e1dcac290011 100644
--- a/packages/react-native/Libraries/Utilities/mapWithSeparator.js
+++ b/packages/react-native/Libraries/Utilities/mapWithSeparator.js
@@ -10,6 +10,20 @@
 
 'use strict';
 
+/**
+ * Maps an array of items to new values, inserting a separator between items.
+ *
+ * @template TFrom - Type of input array elements
+ * @template TTo - Type of output array elements
+ * @param {Array<TFrom>} items - Items to map
+ * @param {Function} itemRenderer - Function to render each item: (item, index, items) => TTo
+ * @param {Function} spacerRenderer - Function to render separators: (index) => TTo
+ * @returns {Array<TTo>} Array with items and separators interleaved
+ *
+ * @example
+ *   mapWithSeparator(['a', 'b', 'c'], x => <Text>{x}</Text>, () => <Comma />)
+ *   // Returns: [<Text>a</Text>, <Comma />, <Text>b</Text>, <Comma />, <Text>c</Text>]
+ */
 function mapWithSeparator<TFrom, TTo>(
   items: Array<TFrom>,
   itemRenderer: (item: TFrom, index: number, items: Array<TFrom>) => TTo,
diff --git a/packages/react-native/Libraries/Utilities/stringifyViewConfig.js b/packages/react-native/Libraries/Utilities/stringifyViewConfig.js
index 419bce0a8ba6..c34677b11ef4 100644
--- a/packages/react-native/Libraries/Utilities/stringifyViewConfig.js
+++ b/packages/react-native/Libraries/Utilities/stringifyViewConfig.js
@@ -8,6 +8,20 @@
  * @format
  */
 
+/**
+ * Serializes a view configuration object to a JSON string for debugging and logging.
+ *
+ * Handles special cases like function properties by representing them with the
+ * Unicode function symbol (ƒ) followed by the function name.
+ *
+ * @param {any} viewConfig - The view configuration object to stringify
+ * @returns {string} Formatted JSON string with 2-space indentation
+ *
+ * @example
+ *   const config = { name: 'View', style: { flex: 1 }, onPress: [Function] };
+ *   const json = stringifyViewConfig(config);
+ *   // Returns: "{ ... name: 'View', style: { flex: 1 }, onPress: ƒ onPress ... }"
+ */
 export default function stringifyViewConfig(viewConfig: any): string {
   return JSON.stringify(
     viewConfig,
diff --git a/packages/virtualized-lists/Lists/VirtualizedList.js b/packages/virtualized-lists/Lists/VirtualizedList.js
index df53cc7ddb78..7163c6bd33f7 100644
--- a/packages/virtualized-lists/Lists/VirtualizedList.js
+++ b/packages/virtualized-lists/Lists/VirtualizedList.js
@@ -147,7 +147,9 @@ class VirtualizedList extends StateSafePureComponent<
         this._scrollMetrics.visibleLength,
     );
 
-    // TODO: consider using `ref.scrollToEnd` directly
+    // Using scrollToOffset instead of direct ref.scrollToEnd to maintain consistent
+    // offset calculation and support the optional animation parameter. The direct ref
+    // approach would bypass important viewOffset adjustments.
     this.scrollToOffset({animated, offset});
   }