diff --git a/usegalaxy.org/annotation.yml b/usegalaxy.org/annotation.yml index 727d454f..9c20fdf2 100644 --- a/usegalaxy.org/annotation.yml +++ b/usegalaxy.org/annotation.yml @@ -150,3 +150,9 @@ tools: owner: bgruening - name: staramr owner: iuc +- name: prodigal + owner: iuc +- name: argnorm + owner: iuc +- name: mmseqs2_taxonomy_assignment + owner: iuc diff --git a/usegalaxy.org/annotation.yml.lock b/usegalaxy.org/annotation.yml.lock index a4b6e202..9c88189f 100644 --- a/usegalaxy.org/annotation.yml.lock +++ b/usegalaxy.org/annotation.yml.lock @@ -615,3 +615,21 @@ tools: - eaa563bd535a tool_panel_section_id: annotation tool_panel_section_label: Annotation +- name: prodigal + owner: iuc + revisions: + - 91791b6ecd38 + tool_panel_section_id: annotation + tool_panel_section_label: Annotation +- name: argnorm + owner: iuc + revisions: + - d8e95a03321a + tool_panel_section_id: annotation + tool_panel_section_label: Annotation +- name: mmseqs2_taxonomy_assignment + owner: iuc + revisions: + - 876d26806584 + tool_panel_section_id: annotation + tool_panel_section_label: Annotation diff --git a/usegalaxy.org/fasta_fastq.yml b/usegalaxy.org/fasta_fastq.yml index b16522cc..abf6a7b0 100644 --- a/usegalaxy.org/fasta_fastq.yml +++ b/usegalaxy.org/fasta_fastq.yml @@ -37,7 +37,7 @@ tools: - name: seqkit_grep owner: iuc - name: seqkit_split2 - owner: iuc + owner: iuc - name: fastq_paired_end_splitter owner: devteam - name: fastq_masker_by_quality @@ -102,3 +102,5 @@ tools: owner: iuc - name: fasta_regex_finder owner: mbernt +- name: seqkit_translate + owner: iuc diff --git a/usegalaxy.org/fasta_fastq.yml.lock b/usegalaxy.org/fasta_fastq.yml.lock index 0cd5d268..5e0a291f 100644 --- a/usegalaxy.org/fasta_fastq.yml.lock +++ b/usegalaxy.org/fasta_fastq.yml.lock @@ -458,3 +458,10 @@ tools: - 9a811adb714f tool_panel_section_id: fasta_fastq tool_panel_section_label: FASTA/FASTQ +- name: seqkit_translate + owner: iuc + revisions: + - 0e0b003c711f + - d35d114c26a7 + tool_panel_section_id: fasta_fastq + tool_panel_section_label: FASTA/FASTQ diff --git a/usegalaxy.org/hicexplorer.yml.lock b/usegalaxy.org/hicexplorer.yml.lock index ba5392f3..72441746 100644 --- a/usegalaxy.org/hicexplorer.yml.lock +++ b/usegalaxy.org/hicexplorer.yml.lock @@ -66,33 +66,6 @@ tools: - f881c94fb3b3 tool_panel_section_id: hicexplorer tool_panel_section_label: HiCExplorer -- name: hicexplorer_chicqualitycontrol - owner: bgruening - revisions: - - 9ea228a9afc8 - - a63e9713c39d - - b892fa1fcaec - - f6a169b5e43b - tool_panel_section_id: hicexplorer - tool_panel_section_label: HiCExplorer -- name: hicexplorer_chicsignificantinteractions - owner: bgruening - revisions: - - 45a386d18509 - - 640e0e45518a - - f8320df1866b - - ff1af7bac1cb - tool_panel_section_id: hicexplorer - tool_panel_section_label: HiCExplorer -- name: hicexplorer_chicviewpoint - owner: bgruening - revisions: - - 37125838e360 - - 40fee49bc6c3 - - c4ed35f4f77f - - f881c94fb3b3 - tool_panel_section_id: hicexplorer - tool_panel_section_label: HiCExplorer - name: hicexplorer_chicviewpointbackgroundmodel owner: bgruening revisions: diff --git a/usegalaxy.org/metabolomics.yml b/usegalaxy.org/metabolomics.yml index f81c5c61..de7383ed 100644 --- a/usegalaxy.org/metabolomics.yml +++ b/usegalaxy.org/metabolomics.yml @@ -22,3 +22,5 @@ tools: owner: recetox - name: mfassignr_mfassign owner: recetox +- name: table_pandas_rename_column + owner: recetox diff --git a/usegalaxy.org/metabolomics.yml.lock b/usegalaxy.org/metabolomics.yml.lock index 0fd0a962..3e2566fc 100644 --- a/usegalaxy.org/metabolomics.yml.lock +++ b/usegalaxy.org/metabolomics.yml.lock @@ -69,3 +69,10 @@ tools: - 22c80f584bb1 tool_panel_section_id: metabolomics tool_panel_section_label: Metabolomics +- name: table_pandas_rename_column + owner: recetox + revisions: + - 3f54cd56a65e + - 8537763e4713 + tool_panel_section_id: metabolomics + tool_panel_section_label: Metabolomics diff --git a/usegalaxy.org/metagenomic_analysis.yml.lock b/usegalaxy.org/metagenomic_analysis.yml.lock index 89d12977..e0b71870 100644 --- a/usegalaxy.org/metagenomic_analysis.yml.lock +++ b/usegalaxy.org/metagenomic_analysis.yml.lock @@ -973,13 +973,6 @@ tools: - fac3911ad3b6 tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis -- name: cami_amber_convert - owner: iuc - revisions: - - 848594e0be6a - - fac3911ad3b6 - tool_panel_section_id: metagenomic_analysis - tool_panel_section_label: Metagenomic Analysis - name: cami_amber owner: iuc revisions: diff --git a/usegalaxy.org/multiple_alignments.yml b/usegalaxy.org/multiple_alignments.yml index de34c8df..7441eaee 100644 --- a/usegalaxy.org/multiple_alignments.yml +++ b/usegalaxy.org/multiple_alignments.yml @@ -44,3 +44,5 @@ tools: owner: iuc - name: ucsc_maftoaxt owner: iuc +- name: mmseqs2_easy_linclust_clustering + owner: iuc diff --git a/usegalaxy.org/multiple_alignments.yml.lock b/usegalaxy.org/multiple_alignments.yml.lock index 241b160c..f8d77cf5 100644 --- a/usegalaxy.org/multiple_alignments.yml.lock +++ b/usegalaxy.org/multiple_alignments.yml.lock @@ -194,3 +194,9 @@ tools: - bb486fb0103d tool_panel_section_id: multiple_alignments tool_panel_section_label: Multiple Alignments +- name: mmseqs2_easy_linclust_clustering + owner: iuc + revisions: + - b174c3405549 + tool_panel_section_id: multiple_alignments + tool_panel_section_label: Multiple Alignments