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Make Simple Cell Identification Pipe #13

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hmgene opened this issue Dec 20, 2020 · 2 comments

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hmgene commented Dec 20, 2020

working pipeline

identify-celltype.sh merged.harmony.rds icell
icell/celltypes.txt # chosen cell types
/meta.txt # celltype calls

Owner Author

hmgene commented Dec 20, 2020

read for automation
https://jef.works/blog/2018/02/06/fun-with-word2vec/

Owner Author

hmgene commented Dec 23, 2020

found this is semi-auto
https://github.com/powellgenomicslab/scPred

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