Unable to import *.pvd #1
Comments
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Sorry for the late reply. It seems that there is a problem with the VTK library, which version did you install? |
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My organization doesn't allow us to use conda, so I had tried this first: Are there other ways to get 8.2.0, I'm only seeing the |
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It seems like VTK abandoned v8.2.0 from PyPi. Could you try VTK v8.1.2 instead? |
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The only versions I can install are: Sorry my computer is locked down so hard, it's been a recent change that we've had and I'm not use to the limitations... |
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Hi @ldecicco-USGS , I think I misunderstood the cause, sorry. |
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My path now is: ...\AppData\Roaming\Python\Python311\site-packages\ogs\bin The only exe that looks right is OGS2VTK.exe...does that sound OK? options("r2ogs6.default_ogs6_bin_path" = "C:/Users/ldecicco/AppData/Roaming/Python/Python311/site-packages/ogs/bin/OGS2VTK.exe")When I run that, I'm getting: ogs6_run_simulation(ogs6_obj)
PARSE ERROR: Argument: C:/Users/ldecicco/AppData/Local/Temp/1/RtmpyOIgFm/my_simulation.prj
Couldn't find match for argument
Brief USAGE:
C:\Users\ldecicco\AppData\Roaming\Python\PYTHON~1\SITE-P~1\ogs\bin\OGS2V
TK.exe [--ascii_output] -o <file
name of output mesh> -i <file name
of input mesh> [--] [--version]
[-h]
For complete USAGE and HELP type:
C:\Users\ldecicco\AppData\Roaming\Python\PYTHON~1\SITE-P~1\ogs\bin\OGS2VTK.exe --help
Error in ogs6_read_output_files(ogs6_obj = ogs6_obj) :
Output file not written out correctly.
Unable to import *.pvd
These are the files in that bin folder, is there something else I should use in the "r2ogs6.default_ogs6_bin_path"? list.files(path = "C:/Users/ldecicco/AppData/Roaming/Python/Python311/site-packages/ogs/bin/")
[1] "addDataToRaster.exe"
[2] "AddElementQuality.exe"
[3] "AddFaultToVoxelGrid.exe"
[4] "AddLayer.exe"
[5] "api-ms-win-core-console-l1-1-0.dll"
[6] "api-ms-win-core-console-l1-2-0.dll"
[7] "api-ms-win-core-datetime-l1-1-0.dll"
[8] "api-ms-win-core-debug-l1-1-0.dll"
[9] "api-ms-win-core-errorhandling-l1-1-0.dll"
[10] "api-ms-win-core-fibers-l1-1-0.dll"
[11] "api-ms-win-core-file-l1-1-0.dll"
[12] "api-ms-win-core-file-l1-2-0.dll"
[13] "api-ms-win-core-file-l2-1-0.dll"
[14] "api-ms-win-core-handle-l1-1-0.dll"
[15] "api-ms-win-core-heap-l1-1-0.dll"
[16] "api-ms-win-core-interlocked-l1-1-0.dll"
[17] "api-ms-win-core-libraryloader-l1-1-0.dll"
[18] "api-ms-win-core-localization-l1-2-0.dll"
[19] "api-ms-win-core-memory-l1-1-0.dll"
[20] "api-ms-win-core-namedpipe-l1-1-0.dll"
[21] "api-ms-win-core-processenvironment-l1-1-0.dll"
[22] "api-ms-win-core-processthreads-l1-1-0.dll"
[23] "api-ms-win-core-processthreads-l1-1-1.dll"
[24] "api-ms-win-core-profile-l1-1-0.dll"
[25] "api-ms-win-core-rtlsupport-l1-1-0.dll"
[26] "api-ms-win-core-string-l1-1-0.dll"
[27] "api-ms-win-core-synch-l1-1-0.dll"
[28] "api-ms-win-core-synch-l1-2-0.dll"
[29] "api-ms-win-core-sysinfo-l1-1-0.dll"
[30] "api-ms-win-core-timezone-l1-1-0.dll"
[31] "api-ms-win-core-util-l1-1-0.dll"
[32] "api-ms-win-crt-conio-l1-1-0.dll"
[33] "api-ms-win-crt-convert-l1-1-0.dll"
[34] "api-ms-win-crt-environment-l1-1-0.dll"
[35] "api-ms-win-crt-filesystem-l1-1-0.dll"
[36] "api-ms-win-crt-heap-l1-1-0.dll"
[37] "api-ms-win-crt-locale-l1-1-0.dll"
[38] "api-ms-win-crt-math-l1-1-0.dll"
[39] "api-ms-win-crt-multibyte-l1-1-0.dll"
[40] "api-ms-win-crt-private-l1-1-0.dll"
[41] "api-ms-win-crt-process-l1-1-0.dll"
[42] "api-ms-win-crt-runtime-l1-1-0.dll"
[43] "api-ms-win-crt-stdio-l1-1-0.dll"
[44] "api-ms-win-crt-string-l1-1-0.dll"
[45] "api-ms-win-crt-time-l1-1-0.dll"
[46] "api-ms-win-crt-utility-l1-1-0.dll"
[47] "appendLinesAlongPolyline.exe"
[48] "ApplicationsFileIO.dll"
[49] "ApplicationsLib.dll"
[50] "AssignRasterDataToMesh.exe"
[51] "BaseLib.dll"
[52] "checkMesh.exe"
[53] "ChemistryLib.dll"
[54] "CMakeInfoLib.dll"
[55] "ComponentTransport.dll"
[56] "ComputeNodeAreasFromSurfaceMesh.exe"
[57] "computeSurfaceNodeIDsInPolygonalRegion.exe"
[58] "concrt140.dll"
[59] "constructMeshesFromGeometry.exe"
[60] "convertGEO.exe"
[61] "convertToLinearMesh.exe"
[62] "convertVtkDataArrayToVtkDataArray.exe"
[63] "CreateBoundaryConditionsAlongPolylines.exe"
[64] "createIntermediateRasters.exe"
[65] "createLayeredMeshFromRasters.exe"
[66] "createMeshElemPropertiesFromASCRaster.exe"
[67] "createNeumannBc.exe"
[68] "createQuadraticMesh.exe"
[69] "createRaster.exe"
[70] "DataHolderLib.dll"
[71] "editMaterialID.exe"
[72] "ExtractBoundary.exe"
[73] "ExtractMaterials.exe"
[74] "ExtractSurface.exe"
[75] "generateGeometry.exe"
[76] "generateMatPropsFromMatID.exe"
[77] "generateStructuredMesh.exe"
[78] "GeoLib.dll"
[79] "geometryToGmshGeo.exe"
[80] "GitInfoLib.dll"
[81] "GMSH2OGS.exe"
[82] "GocadSGridReader.exe"
[83] "GocadTSurfaceReader.exe"
[84] "HeatConduction.dll"
[85] "HeatTransportBHE.dll"
[86] "HT.dll"
[87] "HydroMechanics.dll"
[88] "identifySubdomains.exe"
[89] "IntegrateBoreholesIntoMesh.exe"
[90] "ipDataToPointCloud.exe"
[91] "Layers2Grid.exe"
[92] "LIE.dll"
[93] "LIECommon.dll"
[94] "LiquidFlow.dll"
[95] "MapGeometryToMeshSurface.exe"
[96] "MaterialLib.dll"
[97] "MaterialLib_FractureModels.dll"
[98] "MaterialLib_SolidModels.dll"
[99] "MathLib.dll"
[100] "Mesh2Raster.exe"
[101] "MeshGeoToolsLib.dll"
[102] "MeshLib.dll"
[103] "MeshMapping.exe"
[104] "MoveGeometry.exe"
[105] "MoveMesh.exe"
[106] "mpmetis.exe"
[107] "msvcp140.dll"
[108] "msvcp140_1.dll"
[109] "msvcp140_2.dll"
[110] "msvcp140_atomic_wait.dll"
[111] "msvcp140_codecvt_ids.dll"
[112] "NodeReordering.exe"
[113] "NumLib.dll"
[114] "OGS2VTK.exe"
[115] "OpenGeoSysCND.xsd"
[116] "OpenGeoSysGLI.xsd"
[117] "OpenGeoSysNum.xsd"
[118] "OpenGeoSysProject.xsd"
[119] "OpenGeoSysSTN.xsd"
[120] "ParameterLib.dll"
[121] "partmesh.exe"
[122] "postLIE.exe"
[123] "ProcessLib.dll"
[124] "ProcessLibBoundaryConditionAndSourceTermPython.dll"
[125] "ProcessLibBoundaryConditionAndSourceTermPythonModule.dll"
[126] "PVD2XDMF.exe"
[127] "pvtu2vtu.exe"
[128] "python3.dll"
[129] "python311.dll"
[130] "queryMesh.exe"
[131] "Raster2ASC.exe"
[132] "Raster2Mesh.exe"
[133] "RemoveGhostData.exe"
[134] "removeMeshElements.exe"
[135] "ReorderMesh.exe"
[136] "ResetPropertiesInPolygonalRegion.exe"
[137] "reviseMesh.exe"
[138] "RichardsComponentTransport.dll"
[139] "RichardsFlow.dll"
[140] "RichardsMechanics.dll"
[141] "scaleProperty.exe"
[142] "SmallDeformation.dll"
[143] "SmallDeformationNonlocal.dll"
[144] "SteadyStateDiffusion.dll"
[145] "StokesFlow.dll"
[146] "swapNodeCoordinateAxes.exe"
[147] "SWMMConverter.exe"
[148] "TecPlotTools.exe"
[149] "TES.dll"
[150] "TestInfoLib.dll"
[151] "tetgen.exe"
[152] "ThermalTwoPhaseFlowWithPP.dll"
[153] "ThermoHydroMechanics.dll"
[154] "ThermoMechanicalPhaseField.dll"
[155] "ThermoMechanics.dll"
[156] "ThermoRichardsFlow.dll"
[157] "ThermoRichardsMechanics.dll"
[158] "TIN2VTK.exe"
[159] "TwoPhaseFlowWithPP.dll"
[160] "TwoPhaseFlowWithPrho.dll"
[161] "ucrtbase.dll"
[162] "vcomp140.dll"
[163] "vcruntime140.dll"
[164] "vcruntime140_1.dll"
[165] "VTK2OGS.exe"
[166] "VTK2TIN.exe"
[167] "vtkdiff.exe"
[168] "Vtu2Grid.exe" |
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@ldecicco-USGS Sorry for the late reply. You are in the wrong directory. The ogs executable is called |
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The master branch contains an updated version including a more handy way to install the Python environment and function to install OpenGeoSys. Please see the README. I tested it on Windows 10 with Python 3.11. |
I'm having trouble running the simulation. I'm not 100% sure I have everything installed correctly.
First, I don't have access to "conda", so I can't use the installation instructions exactly.
In my Terminal, I ran:
Does this message ring a bell that some installation is not done correctly?
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