diff --git a/vignettes/laminr.Rmd b/vignettes/laminr.Rmd index 072514aa..b2976185 100644 --- a/vignettes/laminr.Rmd +++ b/vignettes/laminr.Rmd @@ -25,7 +25,7 @@ This vignette introduces the basic **{laminr}** workflow. Install **{laminr}** from CRAN: ```r -install.packages("laminr") +install.packages("laminr", dependencies = TRUE) ``` Install `lamindb` from PyPI: @@ -41,9 +41,9 @@ lamin connect / ``` This instance acts as the default instance for everything that follows. -Any new records or other changes will be added here. +Any data and tracking information will be added to it. -# Connect to the default instance +# Start your analysis Load **{laminr}** to get started. @@ -55,14 +55,11 @@ Create your default database `db` object for this R session: ```{r connect-default} db <- connect() -db ``` It is used to manage all datasets and metadata entities. -# Track data lineage - -LaminDB can track which scripts or notebooks were used to create data. +LaminDB tracks which code is used to create data. To track the current source code, run: ```{r track, eval = submit_eval} @@ -72,10 +69,10 @@ db$track("I8BlHXFXqZOG0000", path = "laminr.Rmd") -## Connect to other instances +# Connect to other instances It is possible to connect to any LaminDB instance for reading data. Connect to the public CELLxGENE instance: