From 8606ab1a7c81fb8e3a5babd77971955205d1541b Mon Sep 17 00:00:00 2001 From: mat10d Date: Thu, 21 Nov 2024 17:16:24 -0500 Subject: [PATCH] update citation --- README.md | 4 ++-- scripts/plm/esm2_15B_exp.sh | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index cae9120..68a9ff8 100644 --- a/README.md +++ b/README.md @@ -116,7 +116,7 @@ If you use this code in your research, please cite our paper: ``` @ARTICLE author={Jiang, Kaiyi and Yan, Zhaoqing and Di Bernardo, Matteo and Sgrizzi, Samantha R. and Villiger, Lukas and Kayabölen, Alişan and Kim, Byungji and Carscadden, Josephine K. and Hiraizumi, Masahiro and Nishimasu, Hiroshi and Gootenberg, Jonathan S. and Abudayyeh, Omar O.} -title={Rapid protein evolution by few-shot learning with a protein language model}, +title={Rapid in silico directed evolution by a protein language model with EVOLVEpro}, year={2024}, -DOI={10.1101/2024.07.17.604015} +DOI={10.1126/science.adr6006} ``` \ No newline at end of file diff --git a/scripts/plm/esm2_15B_exp.sh b/scripts/plm/esm2_15B_exp.sh index d594f9f..e418ffd 100644 --- a/scripts/plm/esm2_15B_exp.sh +++ b/scripts/plm/esm2_15B_exp.sh @@ -17,7 +17,7 @@ conda activate embeddings cd /orcd/archive/abugoot/001/Projects/Matteo/Github/EvolvePro -study_names=("t7_pol" "mlv" "bxb1") +study_names=("t7_pol" "t7_pol_2nd" "t7_pol_3rd" "mlv" "bxb1") model_names=("esm2_t48_15B_UR50D") fasta_path="output/exp/" results_path="output/plm/esm/"