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bio_intervalrelated.ipynb Error in example #990

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Trinitow opened this issue May 14, 2024 · 2 comments
Open

bio_intervalrelated.ipynb Error in example #990

Trinitow opened this issue May 14, 2024 · 2 comments
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@Trinitow
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Trinitow commented May 14, 2024

When executing the example file bio_intervalrelated.ipynb

at the paragraph:

Process ecg

ecg_signals, info = nk.ecg_process(data["ECG"], sampling_rate=100)

nk.ecg_plot(ecg_signals[:3000], info)

the following error appears:


TypeError Traceback (most recent call last)
File ~/opt/anaconda3/lib/python3.9/site-packages/pandas/core/indexes/base.py:3621, in Index.get_loc(self, key, method, tolerance)
3620 try:
-> 3621 return self._engine.get_loc(casted_key)
3622 except KeyError as err:

File ~/opt/anaconda3/lib/python3.9/site-packages/pandas/_libs/index.pyx:136, in pandas._libs.index.IndexEngine.get_loc()

File ~/opt/anaconda3/lib/python3.9/site-packages/pandas/_libs/index.pyx:142, in pandas._libs.index.IndexEngine.get_loc()

TypeError: '(slice(None, None, None), None)' is an invalid key

During handling of the above exception, another exception occurred:

InvalidIndexError Traceback (most recent call last)
Input In [5], in <cell line: 4>()
1 # Process ecg
2 ecg_signals, info = nk.ecg_process(data["ECG"], sampling_rate=100)
----> 4 nk.ecg_plot(ecg_signals[:3000], info)

File ~/opt/anaconda3/lib/python3.9/site-packages/neurokit2/ecg/ecg_plot.py:120, in ecg_plot(ecg_signals, info)
107 ax1 = _signal_rate_plot(
108 ecg_signals["ECG_Rate"].values,
109 info["ECG_R_Peaks"],
...
5635 # if key is not a scalar, directly raise an error (the code below
5636 # would convert to numpy arrays and raise later any way) - GH29926
-> 5637 raise InvalidIndexError(key)

InvalidIndexError: (slice(None, None, None), None)
Output is truncated. View as a scrollable element or open in a text editor. Adjust cell output settings...

Ohne Titel

The plot is incomplete

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welcome bot commented May 14, 2024

Hi 👋 Thanks for reaching out and opening your first issue here! We'll try to come back to you as soon as possible. ❤️ kenobi

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stale bot commented Jan 31, 2025

Is this still relevant? If so, what is blocking it? Is there anything you can do to help move it forward?

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs.

@stale stale bot added the wontfix This will not be worked on label Jan 31, 2025
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