output from registration aren't correct

[ThoumyreStanislas]

After testing the multiQC for ants and antsApplyTransform I noticed that the output for the test of ants -classic and quick, the warped image was not good. The output of antsApplyTransform is also incorrect.

output of ants classic and quick:

output of antsApplyTransform:

[gagnonanthony]

I think this might be due to the cropped test data we use. I am using both modules in nf-pediatric and results are good. Maybe try changing the test data for a complete brain?

[AlexVCaron]

It used to work correctly. I'll try to fix the test with the cropped dataset. It's much faster with it and it should work without much hacking at the default parameters

[AlexVCaron]

Closed by #175