Import S4Vectors functions

lambdamoses · lambdamoses · commit 59e655f40a92 · 2024-10-24T21:57:46.000-04:00
diff --git a/.Rbuildignore b/.Rbuildignore
@@ -8,5 +8,5 @@
 ^pkgdown$
 ^\.github$
 ^\.covrignore$
-Dockerfile
-*.sh
+Dockerfile$
+^.*\.sh$
diff --git a/NAMESPACE b/NAMESPACE
@@ -77,8 +77,8 @@ importFrom(RSpectra,eigs_sym)
 importFrom(S4Vectors,"metadata<-")
 importFrom(S4Vectors,DataFrame)
 importFrom(S4Vectors,Rle)
-importFrom(S4Vectors,combineCols)
 importFrom(S4Vectors,make_zero_col_DFrame)
+importFrom(S4Vectors,mcols)
 importFrom(S4Vectors,metadata)
 importFrom(SingleCellExperiment,"int_colData<-")
 importFrom(SingleCellExperiment,"reducedDim<-")
diff --git a/R/featureData.R b/R/featureData.R
@@ -1,3 +1,4 @@
+#' @importFrom S4Vectors mcols metadata metadata<-
 .check_old_params <- function(params, old_params, name, not_check) {
     if (!identical(not_check, NA_character_))
         params <- params[!names(params) %in% not_check]

Original file line number	Diff line number	Diff line change
`@@ -1,3 +1,4 @@`
	`1`	`+#' @importFrom S4Vectors mcols metadata metadata<-`
`1`	`2`	`.check_old_params <- function(params, old_params, name, not_check) {`
`2`	`3`	`if (!identical(not_check, NA_character_))`
`3`	`4`	`params <- params[!names(params) %in% not_check]`