README.md

See the SlicerMorph project for the updated version of this: https://github.com/SlicerMorph/SlicerMorph/tree/master/Docs/ImageStacks

SlicerImageStacks

Scripted utility to load image stacks (e.g. confocal microscopy) more easily.

Basic usage

• use file browser to select list of images.
• enter spacing of original image data
• downsample uses 1/2 the pixels in each dimension (so volume is 1/8 size)
• skipping slices reduces the z-resolution

Installation

ImageStacks module is bundled with the SlicerMorph extension. To use ImageStacks, please download the SlicerMorph extension.