Hi,
Thank you for your excellent work.
Some time ago, I tried to use plinder for research and installed it with pip, but I noticed that some commands and module imports gave me errors.
Since I usually use conda and mamba to build environments for my study, I thought it would be convenient if conda could resolve all dependencies, so I took the liberty of registering the missing conda dependencies to bioconda including plinder.
As far as I know, conda install -c bioconda plinder will install all dependencies described in this repo.
I am not sure if it works totally or not because I have not tested it in detail, but I don't see the errors I mentioned above after installation.
Please feel free to update the recipe, files to build conda package, if you have any problems.
(If you don't like it, you can have it removed from bioconda.)
Best,
Hi,
Thank you for your excellent work.
Some time ago, I tried to use plinder for research and installed it with pip, but I noticed that some commands and module imports gave me errors.
Since I usually use conda and mamba to build environments for my study, I thought it would be convenient if conda could resolve all dependencies, so I took the liberty of registering the missing conda dependencies to bioconda including plinder.
As far as I know,
conda install -c bioconda plinderwill install all dependencies described in this repo.I am not sure if it works totally or not because I have not tested it in detail, but I don't see the errors I mentioned above after installation.
Please feel free to update the recipe, files to build conda package, if you have any problems.
(If you don't like it, you can have it removed from bioconda.)
Best,