Skip to content
Closed
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 2 additions & 0 deletions .github/dependabot.yml
Original file line number Diff line number Diff line change
Expand Up @@ -8,3 +8,5 @@ updates:
labels:
- "Github CI/CD"
- "no releasenotes"
cooldown:
default-days: 7
10 changes: 5 additions & 5 deletions .github/workflows/devcontainer-docker-image.yml
Original file line number Diff line number Diff line change
Expand Up @@ -23,32 +23,32 @@ jobs:

steps:
- name: Checkout source
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false

- name: Setup Docker buildx
uses: docker/setup-buildx-action@v3.10.0
uses: docker/setup-buildx-action@e468171a9de216ec08956ac3ada2f0791b6bd435 # v3.11.1

- name: Prepare metadata
id: meta
uses: docker/metadata-action@902fa8ec7d6ecbf8d84d538b9b233a880e428804
uses: docker/metadata-action@318604b99e75e41977312d83839a89be02ca4893 # v5.9.0
with:
images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
tags: |
type=sha,enable=true,prefix=git-
type=raw,value=latest

- name: Log into registry ${{ env.REGISTRY }}
uses: docker/login-action@74a5d142397b4f367a81961eba4e8cd7edddf772
uses: docker/login-action@5e57cd118135c172c3672efd75eb46360885c0ef # v3.6.0
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Build and push Docker image
id: docker_build
uses: docker/build-push-action@14487ce63c7a62a4a324b0bfb37086795e31c6c1
uses: docker/build-push-action@263435318d21b8e681c14492fe198d362a7d2c83 # v6.18.0
with:
context: .
file: scripts/dev.Dockerfile
Expand Down
10 changes: 5 additions & 5 deletions .github/workflows/docker-image.yml
Original file line number Diff line number Diff line change
Expand Up @@ -13,19 +13,19 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false

- name: Login to Docker Hub
uses: docker/login-action@74a5d142397b4f367a81961eba4e8cd7edddf772
uses: docker/login-action@5e57cd118135c172c3672efd75eb46360885c0ef # v3.6.0
with:
username: ${{ secrets.DOCKERHUB_USERNAME }}
password: ${{ secrets.DOCKERHUB_TOKEN }}

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@902fa8ec7d6ecbf8d84d538b9b233a880e428804
uses: docker/metadata-action@318604b99e75e41977312d83839a89be02ca4893 # v5.9.0
with:
images: |
name=pymc/pymc,enable=true
Expand All @@ -36,7 +36,7 @@ jobs:
type=semver,pattern={{major}}.{{minor}}

- name: Build and load image
uses: docker/build-push-action@14487ce63c7a62a4a324b0bfb37086795e31c6c1
uses: docker/build-push-action@263435318d21b8e681c14492fe198d362a7d2c83 # v6.18.0
with:
context: .
file: scripts/Dockerfile
Expand All @@ -48,7 +48,7 @@ jobs:
docker run --rm ${{ env.CONTAINER_NAME }} conda run -n pymc-dev python -c 'import pymc;print(pymc.__version__)'

- name: Build and push
uses: docker/build-push-action@14487ce63c7a62a4a324b0bfb37086795e31c6c1
uses: docker/build-push-action@263435318d21b8e681c14492fe198d362a7d2c83 # v6.18.0
with:
context: .
push: true
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/mypy.yml
Original file line number Diff line number Diff line change
Expand Up @@ -12,10 +12,10 @@ jobs:
mypy:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false
- uses: mamba-org/setup-micromamba@v2
- uses: mamba-org/setup-micromamba@add3a49764cedee8ee24e82dfde87f5bc2914462 # v2.0.7
with:
environment-file: conda-envs/environment-test.yml
create-args: >-
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/pr-auto-label.yml
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Sync labels with closing issues
uses: williambdean/[email protected].4
uses: williambdean/closing-labels@7a4384e0e725b80eee0142265d36c1332fda5f7a # v0.0.6
with:
exclude: "help wanted,needs info,beginner friendly"
env:
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/publish-release-notes-to-discourse.yml
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,12 @@ jobs:

steps:
- name: Checkout repository
uses: actions/checkout@v4
uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false

- name: Set up Python
uses: actions/setup-python@v4
uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
with:
python-version: "3.11"

Expand Down
8 changes: 4 additions & 4 deletions .github/workflows/release.yml
Original file line number Diff line number Diff line change
Expand Up @@ -16,11 +16,11 @@ jobs:
attestations: write
id-token: write
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
fetch-depth: 0
persist-credentials: false
- uses: hynek/build-and-inspect-python-package@b5076c307dc91924a82ad150cdd1533b444d3310 # v2.12.0
- uses: hynek/build-and-inspect-python-package@efb823f52190ad02594531168b7a2d5790e66516 # v2.14.0
with:
# Prove that the packages were built in the context of this workflow.
attest-build-provenance-github: true
Expand All @@ -38,12 +38,12 @@ jobs:
id-token: write
steps:
- name: Download Distribution Artifacts
uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4.3.0
uses: actions/download-artifact@018cc2cf5baa6db3ef3c5f8a56943fffe632ef53 # v6.0.0
with:
# The build-and-inspect-python-package action invokes upload-artifact.
# These are the correct arguments from that action.
name: Packages
path: dist
- name: Publish Package to PyPI
uses: pypa/gh-action-pypi-publish@76f52bc884231f62b9a034ebfe128415bbaabdfc # v1.12.4
uses: pypa/gh-action-pypi-publish@ed0c53931b1dc9bd32cbe73a98c7f6766f8a527e # v1.13.0
# Implicitly attests that the packages were uploaded in the context of this workflow.
2 changes: 1 addition & 1 deletion .github/workflows/rtd-link-preview.yml
Original file line number Diff line number Diff line change
Expand Up @@ -11,6 +11,6 @@ jobs:
permissions:
pull-requests: write
steps:
- uses: readthedocs/actions/preview@v1
- uses: readthedocs/actions/preview@b8bba1484329bda1a3abe986df7ebc80a8950333 # v1.5
with:
project-slug: "pymc"
2 changes: 1 addition & 1 deletion .github/workflows/slash_dispatch.yml
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Slash Command Dispatch
uses: peter-evans/slash-command-dispatch@v4
uses: peter-evans/slash-command-dispatch@13bc09769d122a64f75aa5037256f6f2d78be8c4 # v4.0.0
with:
token: ${{ secrets.ACTION_TRIGGER_TOKEN }}
issue-type: pull-request
Expand Down
34 changes: 17 additions & 17 deletions .github/workflows/tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -31,11 +31,11 @@ jobs:
outputs:
changes: ${{ steps.changes.outputs.src }}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
fetch-depth: 0
persist-credentials: false
- uses: dorny/paths-filter@v3
- uses: dorny/paths-filter@de90cc6fb38fc0963ad72b210f1f284cd68cea36 # v3.0.2
id: changes
with:
filters: |
Expand Down Expand Up @@ -151,10 +151,10 @@ jobs:
run:
shell: bash -leo pipefail {0}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false
- uses: mamba-org/setup-micromamba@v2
- uses: mamba-org/setup-micromamba@add3a49764cedee8ee24e82dfde87f5bc2914462 # v2.0.7
with:
environment-file: conda-envs/environment-test.yml
create-args: >-
Expand All @@ -171,7 +171,7 @@ jobs:
run: |
python -m pytest -vv --cov=pymc --cov-report=xml --no-cov-on-fail --cov-report term --durations=50 $TEST_SUBSET
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v5
uses: codecov/codecov-action@5a1091511ad55cbe89839c7260b706298ca349f7 # v5.5.1
with:
token: ${{ secrets.CODECOV_TOKEN }} # use token for more robust uploads
env_vars: TEST_SUBSET
Expand Down Expand Up @@ -201,10 +201,10 @@ jobs:
run:
shell: cmd /C call {0}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false
- uses: mamba-org/setup-micromamba@v2
- uses: mamba-org/setup-micromamba@add3a49764cedee8ee24e82dfde87f5bc2914462 # v2.0.7
with:
environment-file: conda-envs/windows-environment-test.yml
create-args: >-
Expand All @@ -223,7 +223,7 @@ jobs:
run: >-
python -m pytest -vv --cov=pymc --cov-report=xml --no-cov-on-fail --cov-report term --durations=50 %TEST_SUBSET%
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v5
uses: codecov/codecov-action@5a1091511ad55cbe89839c7260b706298ca349f7 # v5.5.1
with:
token: ${{ secrets.CODECOV_TOKEN }} # use token for more robust uploads
env_vars: TEST_SUBSET
Expand Down Expand Up @@ -261,10 +261,10 @@ jobs:
run:
shell: bash -leo pipefail {0}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false
- uses: mamba-org/setup-micromamba@v2
- uses: mamba-org/setup-micromamba@add3a49764cedee8ee24e82dfde87f5bc2914462 # v2.0.7
with:
environment-file: conda-envs/environment-test.yml
create-args: >-
Expand All @@ -281,7 +281,7 @@ jobs:
run: |
python -m pytest -vv --cov=pymc --cov-report=xml --no-cov-on-fail --cov-report term --durations=50 $TEST_SUBSET
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v5
uses: codecov/codecov-action@5a1091511ad55cbe89839c7260b706298ca349f7 # v5.5.1
with:
token: ${{ secrets.CODECOV_TOKEN }} # use token for more robust uploads
env_vars: TEST_SUBSET
Expand Down Expand Up @@ -311,10 +311,10 @@ jobs:
run:
shell: bash -leo pipefail {0}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false
- uses: mamba-org/setup-micromamba@v2
- uses: mamba-org/setup-micromamba@add3a49764cedee8ee24e82dfde87f5bc2914462 # v2.0.7
with:
environment-file: conda-envs/environment-alternative-backends.yml
create-args: >-
Expand All @@ -331,7 +331,7 @@ jobs:
run: |
python -m pytest -vv --cov=pymc --cov-report=xml --no-cov-on-fail --cov-report term --durations=50 $TEST_SUBSET
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v5
uses: codecov/codecov-action@5a1091511ad55cbe89839c7260b706298ca349f7 # v5.5.1
with:
token: ${{ secrets.CODECOV_TOKEN }} # use token for more robust uploads
env_vars: TEST_SUBSET
Expand All @@ -357,10 +357,10 @@ jobs:
run:
shell: cmd /C call {0}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false
- uses: mamba-org/setup-micromamba@v2
- uses: mamba-org/setup-micromamba@add3a49764cedee8ee24e82dfde87f5bc2914462 # v2.0.7
with:
environment-file: conda-envs/windows-environment-test.yml
create-args: >-
Expand All @@ -379,7 +379,7 @@ jobs:
run: >-
python -m pytest -vv --cov=pymc --cov-report=xml --no-cov-on-fail --cov-report term --durations=50 %TEST_SUBSET%
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v5
uses: codecov/codecov-action@5a1091511ad55cbe89839c7260b706298ca349f7 # v5.5.1
with:
token: ${{ secrets.CODECOV_TOKEN }} # use token for more robust uploads
env_vars: TEST_SUBSET
Expand Down
6 changes: 3 additions & 3 deletions .github/workflows/zizmor.yml
Original file line number Diff line number Diff line change
Expand Up @@ -15,19 +15,19 @@ jobs:
security-events: write
steps:
- name: Checkout repository
uses: actions/checkout@v4
uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
with:
persist-credentials: false

- uses: hynek/setup-cached-uv@v2
- uses: hynek/setup-cached-uv@757bedc3f972eb7227a1aa657651f15a8527c817 # v2.3.0

- name: Run zizmor 🌈
run: uvx zizmor --format sarif . > results.sarif
env:
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}

- name: Upload SARIF file
uses: github/codeql-action/upload-sarif@v3
uses: github/codeql-action/upload-sarif@0499de31b99561a6d14a36a5f662c2a54f91beee # v4.31.2
with:
# Path to SARIF file relative to the root of the repository
sarif_file: results.sarif
Expand Down