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Pull requests list

threadsafe death tests, update Ubuntu and g++ in CI
#509 opened Feb 10, 2025 by hmusta updated Feb 26, 2025
Optimize querying DBGSSHash
#507 opened Dec 6, 2024 by hmusta updated Feb 11, 2025
Use RowDiff with DBGHashFast in test_aligner_labeled
#505 opened Oct 15, 2024 by adamant-pwn updated Feb 11, 2025
Use BOSS indexing in DBGSuccinct + make RowDiff independent
#484 opened May 22, 2024 by adamant-pwn Loading… updated Feb 7, 2025
Count-based differential assembly
#487 opened Jun 11, 2024 by hmusta Loading… updated Dec 4, 2024
Option to annotate a representative node from each monochromatic contig
#500 opened Oct 2, 2024 by hmusta Loading… updated Oct 12, 2024
Place all relevant headers in /include during installation
#489 opened Jun 20, 2024 by adamant-pwn Loading… updated Jul 1, 2024
Alignment and query cleanups
#271 opened Jan 19, 2021 by karasikov Draft updated Oct 25, 2023
Add checkpointing to metagraph build
#197 opened Sep 8, 2020 by danieldanciu Draft updated Oct 25, 2023
Less stringent alignment and seed filtering
#453 opened Jun 5, 2023 by hmusta Draft updated Oct 25, 2023
5 tasks done
Support outputting alignments in GAF format
#384 opened Feb 7, 2022 by hmusta Draft updated Jun 12, 2023
implement the taxonomic classification with queries on the annotation matrix
#347 opened Aug 2, 2021 by heracle Loading… updated Feb 6, 2022
support for multiple successors at forks
#329 opened Jun 16, 2021 by karasikov Loading… updated Feb 6, 2022
mark rd successors only in forks
#308 opened Apr 2, 2021 by karasikov Loading… updated Feb 6, 2022
Lower RAM implementation of slice_columns for BRWT
#226 opened Oct 26, 2020 by hmusta Draft updated Feb 6, 2022
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