error information in getDistanceMatrix

[Arvinlike]

when I study the example_script.r, an error information occured as fllowed: Error in match.arg(output) : 'arg' should be one of “prop”, “p-counts”, can you help me ?

[chassenr]

Not sure if this is still relevant for you, but you can fix this by changing the line 212 in the unifrac function to:

otuTable.adjustedZeros <- cmultRepl(otuTable, method="CZM", output="p-counts")