Remove additional files adding contents to pyproject.toml

Author: kzscisoft

.pre-commit-config.yaml

@@ -1,9 +1,6 @@
 exclude: '^tests|^docs'
 ci:
-    autofix_commit_msg: |
-        [pre-commit.ci] auto fixes from pre-commit.com hooks
-        for more information, see https://pre-commit.ci
-    autofix_prs: true
+    autofix_prs: false
     autoupdate_branch: ''
     autoupdate_commit_msg: '[pre-commit.ci] pre-commit autoupdate'
     autoupdate_schedule: weekly

examples/Optuna/PyTorch/simvue_optuna_pytorch.py

@@ -97,7 +97,6 @@ def define_model(trial):
 
 
 def objective(trial):
-
     # Generate the model.
     model = define_model(trial).to(DEVICE)
 
@@ -117,7 +116,6 @@ def objective(trial):
 
     # Training of the model.
     for epoch in range(EPOCHS):
-
         train(optimizer, model, train_loader)
         val_accuracy = validate(model, valid_loader)
         trial.report(val_accuracy, epoch)

examples/Tensorflow/dynamic_rnn.py

@@ -14,14 +14,11 @@
 
 
 if __name__ == "__main__":
-
     # Dataset parameters.
     num_classes = 2  # linear sequence or not.
     seq_max_len = 20  # Maximum sequence length.
     seq_min_len = 5  # Minimum sequence length (before padding).
-    masking_val = (
-        -1
-    )  # -1 will represents the mask and be used to pad sequences to a common max length.
+    masking_val = -1  # -1 will represents the mask and be used to pad sequences to a common max length.
     max_value = 10000  # Maximum int value.
 
     # Training Parameters

pyproject.toml

@@ -51,3 +51,28 @@ priority = "supplemental"
 [[tool.poetry.source]]
 name = "PyPI"
 priority = "primary"
+
+
+[tool.ruff]
+lint.extend-select = ["C901"]
+lint.mccabe.max-complexity = 11
+
+[tool.pytest.ini_options]
+addopts = "-p no:warnings --cov=simvue"
+testpaths = [
+    "tests"
+]
+markers = [
+    "client: tests of Simvue client",
+    "converters: tests for Simvue object converters",
+    "dispatch: test data dispatcher",
+    "run: test the simvue Run class",
+    "utilities: test simvue utilities module",
+    "scenario: test scenarios"
+]
+
+[tool.interrogate]
+ignore-init-method = true
+fail-under = 95
+verbose = 1
+exclude = ["docs", "tests"]