diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 371d05f9..09520ac8 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -23,7 +23,7 @@ repos:
         args: [--branch, main, --branch, dev]
       - id: check-added-large-files
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.9.4
+    rev: v0.9.6
     hooks:
       - id: ruff
         args: [ --fix, --exit-non-zero-on-fix, "--ignore=C901" ]
@@ -35,7 +35,7 @@ repos:
         pass_filenames: false
 
   - repo: https://github.com/PyCQA/bandit.git
-    rev: 1.8.2
+    rev: 1.8.3
     hooks:
     -   id: bandit
         args: [-lll, --recursive, clumper]
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 2d6b4967..2a07ae1e 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,23 @@
 # Change log
 
+## [v2.0.0-alpha1](https://github.com/simvue-io/client/releases/tag/v2.0.0a1) - 2025-02-19
+* Fixed `add_alerts` so that it now works with both IDs and names
+* Improved alert and folder deduplication methods to rely on 409 responses from server upon creation
+* Added `attach_to_run` option to create alerts methods so that alerts can be created without a run attached
+* Improved merging of local staging file and _staged dict using `deepmerge` - fixes bugs with tags, alerts and metadata in offline mode
+* Added `started`, `created` and `ended` timestamps to runs in offline mode
+* Remove all erronous server calls in offline mode
+* Fixed method to find simvue.toml config files, now just looks in cwd and home
+* Added run notification option to `run.init` so that users can now get emails upon their runs completing
+* Fixed artifact retrieval by run so that `category` parameter works correctly
+* Fixed bug where file artifacts wouldn't be saved correctly in offline mode if sender runs in different location to script
+* Fixed bug where DEBUG log messages were spamming to the console
+* Fixed link to run dashboard printed to the console by removing `/api`
+* Fixed bug where offline mode wouldn't work if no run name provided
+* Fixed bug where errors would be thrown if a traceback was logged as an event when a run was already terminated
+* Fixed hierarchical artifact retrieval to maintain directory structure
+* Loosened Numpy requirement to >2.0.0
+
 ## [v2.0.0-alpha0](https://github.com/simvue-io/client/releases/tag/v2.0.0a0) - 2025-02-10
 
 * Add support for defining Simvue run defaults using `tool.simvue` in a project `pyproject.toml` file.
diff --git a/CITATION.cff b/CITATION.cff
index b39358d6..d9026ae2 100644
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -42,9 +42,9 @@ keywords:
   - alerting
   - simulation
 license: Apache-2.0
-commit: 5aaebe682d7ec2f80fefc3eb2a8a26f5bdca1e0c
-version: 2.0.0a0
-date-released: '2025-02-11'
+commit: 124b2993d91dbff2e475aa972916b11e7bd02fa4
+version: 2.0.0a1
+date-released: '2025-02-19'
 references:
 - title: mlco2/codecarbon
   version: v2.8.2
diff --git a/poetry.lock b/poetry.lock
index aa295ce7..ed998f4c 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -413,75 +413,76 @@ test-no-images = ["pytest", "pytest-cov", "pytest-rerunfailures", "pytest-xdist"
 
 [[package]]
 name = "coverage"
-version = "7.6.10"
+version = "7.6.12"
 description = "Code coverage measurement for Python"
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
 markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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 [package.dependencies]
@@ -492,42 +493,44 @@ toml = ["tomli"]
 
 [[package]]
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 optional = false
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 [package.dependencies]
@@ -540,7 +543,7 @@ nox = ["nox (>=2024.4.15)", "nox[uv] (>=2024.3.2)"]
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 ssh = ["bcrypt (>=3.1.5)"]
-test = ["certifi (>=2024)", "cryptography-vectors (==44.0.0)", "pretend (>=0.7)", "pytest (>=7.4.0)", "pytest-benchmark (>=4.0)", "pytest-cov (>=2.10.1)", "pytest-xdist (>=3.5.0)"]
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 test-randomorder = ["pytest-randomly"]
 
 [[package]]
@@ -560,6 +563,22 @@ files = [
 docs = ["ipython", "matplotlib", "numpydoc", "sphinx"]
 tests = ["pytest", "pytest-cov", "pytest-xdist"]
 
+[[package]]
+name = "deepmerge"
+version = "2.0"
+description = "A toolset for deeply merging Python dictionaries."
+optional = false
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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+]
+
+[package.extras]
+dev = ["black", "build", "mypy", "pytest", "pyupgrade", "twine", "validate-pyproject[all]"]
+
 [[package]]
 name = "dnspython"
 version = "2.7.0"
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+    {file = "ruff-0.9.6-py3-none-win_amd64.whl", hash = "sha256:03482d5c09d90d4ee3f40d97578423698ad895c87314c4de39ed2af945633caa"},
+    {file = "ruff-0.9.6-py3-none-win_arm64.whl", hash = "sha256:0e2bb706a2be7ddfea4a4af918562fdc1bcb16df255e5fa595bbd800ce322a5a"},
+    {file = "ruff-0.9.6.tar.gz", hash = "sha256:81761592f72b620ec8fa1068a6fd00e98a5ebee342a3642efd84454f3031dca9"},
 ]
 
 [[package]]
@@ -2636,4 +2657,4 @@ plot = ["matplotlib", "plotly"]
 [metadata]
 lock-version = "2.1"
 python-versions = ">=3.10,<3.14"
-content-hash = "b87307deab6d125136242de2adc36049337970d6abea23392c9fdf57761230a6"
+content-hash = "b829fc59acd9d10a8a7ca42f30d94775233c526ebcbea192bafaa8e992cc5c05"
diff --git a/pyproject.toml b/pyproject.toml
index bbbfd633..d22de055 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [project]
 name = "simvue"
-version = "2.0.0a0"
+version = "2.0.0a1"
 description = "Simulation tracking and monitoring"
 authors = [
   {name = "Simvue Development Team", email = "info@simvue.io"}
@@ -46,13 +46,14 @@ dependencies = [
   "humanfriendly (>=10.0,<11.0)",
   "randomname (>=0.2.1,<0.3.0)",
   "codecarbon (>=2.8.3,<3.0.0)",
-  "numpy (>=2.2.2,<3.0.0)",
+  "numpy (>=2.0.0,<3.0.0)",
   "flatdict (>=4.0.1,<5.0.0)",
   "semver (>=3.0.4,<4.0.0)",
   "email-validator (>=2.2.0,<3.0.0)",
   "psutil (>=6.1.1,<7.0.0)",
   "tenacity (>=9.0.0,<10.0.0)",
   "typing-extensions (>=4.12.2,<5.0.0) ; python_version < \"3.11\"",
+  "deepmerge (>=2.0,<3.0)",
 ]
 
 [project.urls]
diff --git a/simvue/api/objects/alert/events.py b/simvue/api/objects/alert/events.py
index 0d38b63f..00558ffb 100644
--- a/simvue/api/objects/alert/events.py
+++ b/simvue/api/objects/alert/events.py
@@ -87,6 +87,7 @@ def new(
             _offline=offline,
         )
         _alert._staging |= _alert_definition
+        _alert._params = {"deduplicate": True}
         return _alert
 
 
diff --git a/simvue/api/objects/alert/metrics.py b/simvue/api/objects/alert/metrics.py
index 2fb74f06..e9340873 100644
--- a/simvue/api/objects/alert/metrics.py
+++ b/simvue/api/objects/alert/metrics.py
@@ -105,6 +105,8 @@ def new(
             _offline=offline,
         )
         _alert._staging |= _alert_definition
+        _alert._params = {"deduplicate": True}
+
         return _alert
 
 
@@ -194,6 +196,7 @@ def new(
             _offline=offline,
         )
         _alert._staging |= _alert_definition
+        _alert._params = {"deduplicate": True}
         return _alert
 
 
diff --git a/simvue/api/objects/alert/user.py b/simvue/api/objects/alert/user.py
index 9ddcd6e1..7fdcee43 100644
--- a/simvue/api/objects/alert/user.py
+++ b/simvue/api/objects/alert/user.py
@@ -57,7 +57,7 @@ def new(
             whether this alert should be created locally, default is False
 
         """
-        return UserAlert(
+        _alert = UserAlert(
             name=name,
             description=description,
             notification=notification,
@@ -66,6 +66,8 @@ def new(
             _read_only=False,
             _offline=offline,
         )
+        _alert._params = {"deduplicate": True}
+        return _alert
 
     @classmethod
     def get(
diff --git a/simvue/api/objects/artifact/base.py b/simvue/api/objects/artifact/base.py
index dac009f5..0b5af04d 100644
--- a/simvue/api/objects/artifact/base.py
+++ b/simvue/api/objects/artifact/base.py
@@ -97,6 +97,7 @@ def _upload(self, file: io.BytesIO) -> None:
         _response = sv_post(
             url=_url,
             headers={},
+            params={},
             is_json=False,
             files={"file": file},
             data=self._init_data.get("fields"),
diff --git a/simvue/api/objects/artifact/fetch.py b/simvue/api/objects/artifact/fetch.py
index 88f582ce..1d571266 100644
--- a/simvue/api/objects/artifact/fetch.py
+++ b/simvue/api/objects/artifact/fetch.py
@@ -23,6 +23,62 @@ def __new__(cls, identifier: str | None = None, **kwargs):
         else:
             return ObjectArtifact(identifier=identifier, **kwargs)
 
+    @classmethod
+    def from_run(
+        cls,
+        run_id: str,
+        category: typing.Literal["input", "output", "code"] | None = None,
+        **kwargs,
+    ) -> typing.Generator[tuple[str, FileArtifact | ObjectArtifact], None, None]:
+        """Return artifacts associated with a given run.
+
+        Parameters
+        ----------
+        run_id : str
+            The ID of the run to retriece artifacts from
+        category : typing.Literal["input", "output", "code"] | None, optional
+            The category of artifacts to return, by default all artifacts are returned
+
+        Returns
+        -------
+        typing.Generator[tuple[str, FileArtifact | ObjectArtifact], None, None]
+            The artifacts
+
+        Yields
+        ------
+        Iterator[typing.Generator[tuple[str, FileArtifact | ObjectArtifact], None, None]]
+            identifier for artifact
+            the artifact itself as a class instance
+
+        Raises
+        ------
+        ObjectNotFoundError
+            Raised if artifacts could not be found for that run
+        """
+        _temp = ArtifactBase(**kwargs)
+        _url = URL(_temp._user_config.server.url) / f"runs/{run_id}/artifacts"
+        _response = sv_get(
+            url=f"{_url}", params={"category": category}, headers=_temp._headers
+        )
+        _json_response = get_json_from_response(
+            expected_type=list,
+            response=_response,
+            expected_status=[http.HTTPStatus.OK, http.HTTPStatus.NOT_FOUND],
+            scenario=f"Retrieval of artifacts for run '{run_id}'",
+        )
+
+        if _response.status_code == http.HTTPStatus.NOT_FOUND or not _json_response:
+            raise ObjectNotFoundError(
+                _temp._label, category, extra=f"for run '{run_id}'"
+            )
+
+        for _entry in _json_response:
+            _id = _entry.pop("id")
+            yield (
+                _id,
+                Artifact(_local=True, _read_only=True, identifier=_id, **_entry),
+            )
+
     @classmethod
     def from_name(
         cls, run_id: str, name: str, **kwargs
@@ -99,21 +155,9 @@ def get(
         if (_data := _json_response.get("data")) is None:
             raise RuntimeError(f"Expected key 'data' for retrieval of {_label}s")
 
-        _out_dict: dict[str, FileArtifact | ObjectArtifact] = {}
-
         for _entry in _data:
             _id = _entry.pop("id")
-            if _entry["original_path"]:
-                yield (
-                    _id,
-                    FileArtifact(
-                        _local=True, _read_only=True, identifier=_id, **_entry
-                    ),
-                )
-            else:
-                yield (
-                    _id,
-                    ObjectArtifact(
-                        _local=True, _read_only=True, identifier=_id, **_entry
-                    ),
-                )
+            yield (
+                _id,
+                Artifact(_local=True, _read_only=True, identifier=_id, **_entry),
+            )
diff --git a/simvue/api/objects/artifact/file.py b/simvue/api/objects/artifact/file.py
index 7878d514..54f0a8cb 100644
--- a/simvue/api/objects/artifact/file.py
+++ b/simvue/api/objects/artifact/file.py
@@ -52,14 +52,15 @@ def new(
 
         if _mime_type not in get_mimetypes():
             raise ValueError(f"Invalid MIME type '{mime_type}' specified")
-        file_path = pathlib.Path(file_path)
-        _file_size = file_path.stat().st_size
-        _file_orig_path = file_path.expanduser().absolute()
-        _file_checksum = calculate_sha256(f"{file_path}", is_file=True)
 
-        kwargs.pop("original_path", None)
-        kwargs.pop("size", None)
-        kwargs.pop("checksum", None)
+        if _file_orig_path := kwargs.pop("original_path", None):
+            _file_size = kwargs.pop("size")
+            _file_checksum = kwargs.pop("checksum")
+        else:
+            file_path = pathlib.Path(file_path)
+            _file_size = file_path.stat().st_size
+            _file_orig_path = file_path.expanduser().absolute()
+            _file_checksum = calculate_sha256(f"{file_path}", is_file=True)
 
         _artifact = FileArtifact(
             name=name,
diff --git a/simvue/api/objects/base.py b/simvue/api/objects/base.py
index 7f43904f..f6f61762 100644
--- a/simvue/api/objects/base.py
+++ b/simvue/api/objects/base.py
@@ -17,6 +17,7 @@
 import msgpack
 import pydantic
 
+from simvue.utilities import staging_merger
 from simvue.config.user import SimvueConfiguration
 from simvue.exception import ObjectNotFoundError
 from simvue.version import __version__
@@ -164,10 +165,16 @@ def __init__(
             )
         )
 
-        self._headers: dict[str, str] = {
-            "Authorization": f"Bearer {self._user_config.server.token.get_secret_value()}",
-            "User-Agent": _user_agent or f"Simvue Python client {__version__}",
-        }
+        self._headers: dict[str, str] = (
+            {
+                "Authorization": f"Bearer {self._user_config.server.token.get_secret_value()}",
+                "User-Agent": _user_agent or f"Simvue Python client {__version__}",
+            }
+            if not self._offline
+            else {}
+        )
+
+        self._params: dict[str, str] = {}
 
         self._staging: dict[str, typing.Any] = {}
 
@@ -412,6 +419,7 @@ def _post(self, is_json: bool = True, **kwargs) -> dict[str, typing.Any]:
         _response = sv_post(
             url=f"{self._base_url}",
             headers=self._headers | {"Content-Type": "application/msgpack"},
+            params=self._params,
             data=kwargs,
             is_json=is_json,
         )
@@ -423,7 +431,7 @@ def _post(self, is_json: bool = True, **kwargs) -> dict[str, typing.Any]:
 
         _json_response = get_json_from_response(
             response=_response,
-            expected_status=[http.HTTPStatus.OK],
+            expected_status=[http.HTTPStatus.OK, http.HTTPStatus.CONFLICT],
             scenario=f"Creation of {self._label}",
         )
 
@@ -452,7 +460,7 @@ def _put(self, **kwargs) -> dict[str, typing.Any]:
 
         return get_json_from_response(
             response=_response,
-            expected_status=[http.HTTPStatus.OK],
+            expected_status=[http.HTTPStatus.OK, http.HTTPStatus.CONFLICT],
             scenario=f"Creation of {self._label} '{self._identifier}",
         )
 
@@ -524,7 +532,8 @@ def _cache(self) -> None:
             with self._local_staging_file.open() as in_f:
                 _local_data = json.load(in_f)
 
-        _local_data |= self._staging
+        staging_merger.merge(_local_data, self._staging)
+
         with self._local_staging_file.open("w", encoding="utf-8") as out_f:
             json.dump(_local_data, out_f, indent=2)
 
diff --git a/simvue/api/objects/metrics.py b/simvue/api/objects/metrics.py
index de5d3075..43b75561 100644
--- a/simvue/api/objects/metrics.py
+++ b/simvue/api/objects/metrics.py
@@ -37,7 +37,7 @@ def __init__(
     def new(
         cls, *, run: str, offline: bool = False, metrics: list[MetricSet], **kwargs
     ):
-        """Create a new Events entry on the Simvue server"""
+        """Create a new Metrics entry on the Simvue server"""
         return Metrics(
             run=run,
             metrics=[metric.model_dump() for metric in metrics],
@@ -51,27 +51,23 @@ def get(
         cls,
         metrics: list[str],
         xaxis: typing.Literal["timestamp", "step", "time"],
+        runs: list[str],
         *,
         count: pydantic.PositiveInt | None = None,
         offset: pydantic.PositiveInt | None = None,
         **kwargs,
     ) -> typing.Generator[MetricSet, None, None]:
         _class_instance = cls(_read_only=True, _local=True)
-        if (
-            _data := cls._get_all_objects(
-                count,
-                offset,
-                metrics=json.dumps(metrics),
-                xaxis=xaxis,
-                **kwargs,
-            ).get("data")
-        ) is None:
-            raise RuntimeError(
-                f"Expected key 'data' for retrieval of {_class_instance.__class__.__name__.lower()}s"
-            )
-
-        for _entry in _data:
-            yield MetricSet(**_entry)
+        _data = cls._get_all_objects(
+            count,
+            offset,
+            metrics=json.dumps(metrics),
+            runs=json.dumps(runs),
+            xaxis=xaxis,
+            **kwargs,
+        )
+        # TODO: Temp fix, just return the dictionary. Not sure what format we really want this in...
+        return _data
 
     @pydantic.validate_call
     def span(self, run_ids: list[str]) -> dict[str, int | float]:
diff --git a/simvue/api/objects/run.py b/simvue/api/objects/run.py
index 9841ded5..803681ae 100644
--- a/simvue/api/objects/run.py
+++ b/simvue/api/objects/run.py
@@ -11,6 +11,7 @@
 import typing
 import pydantic
 import datetime
+import time
 
 try:
     from typing import Self
@@ -214,23 +215,31 @@ def heartbeat_timeout(self, time_seconds: int | None) -> None:
 
     @property
     @staging_check
-    def notifications(self) -> typing.Literal["none", "email"]:
-        return self._get_attribute("notifications")
+    def notifications(self) -> typing.Literal["none", "all", "error", "lost"]:
+        return self._get_attribute("notifications")["state"]
 
     @notifications.setter
     @write_only
     @pydantic.validate_call
-    def notifications(self, notifications: typing.Literal["none", "email"]) -> None:
-        self._staging["notifications"] = notifications
+    def notifications(
+        self, notifications: typing.Literal["none", "all", "error", "lost"]
+    ) -> None:
+        self._staging["notifications"] = {"state": notifications}
 
     @property
     @staging_check
-    def alerts(self) -> typing.Generator[str, None, None]:
-        for alert in self.get_alert_details():
-            yield alert["id"]
+    def alerts(self) -> list[str]:
+        if self._offline:
+            return self._get_attribute("alerts")
+
+        return [alert["id"] for alert in self.get_alert_details()]
 
     def get_alert_details(self) -> typing.Generator[dict[str, typing.Any], None, None]:
         """Retrieve the full details of alerts for this run"""
+        if self._offline:
+            raise RuntimeError(
+                "Cannot get alert details from an offline run - use .alerts to access a list of IDs instead"
+            )
         for alert in self._get_attribute("alerts"):
             yield alert["alert"]
 
@@ -238,9 +247,7 @@ def get_alert_details(self) -> typing.Generator[dict[str, typing.Any], None, Non
     @write_only
     @pydantic.validate_call
     def alerts(self, alerts: list[str]) -> None:
-        self._staging["alerts"] = [
-            alert for alert in alerts if alert not in self._staging.get("alerts", [])
-        ]
+        self._staging["alerts"] = list(set(self._staging.get("alerts", []) + alerts))
 
     @property
     @staging_check
@@ -251,6 +258,19 @@ def created(self) -> datetime.datetime | None:
             datetime.datetime.strptime(_created, DATETIME_FORMAT) if _created else None
         )
 
+    @created.setter
+    @write_only
+    @pydantic.validate_call
+    def created(self, created: datetime.datetime) -> None:
+        self._staging["created"] = created.strftime(DATETIME_FORMAT)
+
+    @property
+    @staging_check
+    def runtime(self) -> datetime.datetime | None:
+        """Retrieve created datetime for the run"""
+        _runtime: str | None = self._get_attribute("runtime")
+        return time.strptime(_runtime, "%H:%M:%S.%f") if _runtime else None
+
     @property
     @staging_check
     def started(self) -> datetime.datetime | None:
diff --git a/simvue/api/request.py b/simvue/api/request.py
index 3ebdb86b..8dd6a8bd 100644
--- a/simvue/api/request.py
+++ b/simvue/api/request.py
@@ -64,6 +64,7 @@ def is_retryable_exception(exception: Exception) -> bool:
 def post(
     url: str,
     headers: dict[str, str],
+    params: dict[str, str],
     data: typing.Any,
     is_json: bool = True,
     files: dict[str, typing.Any] | None = None,
@@ -76,6 +77,8 @@ def post(
         URL to post to
     headers : dict[str, str]
         headers for the post request
+    params : dict[str, str]
+        query parameters for the post request
     data : dict[str, typing.Any]
         data to post
     is_json : bool, optional
@@ -95,7 +98,12 @@ def post(
 
     logging.debug(f"POST: {url}\n\tdata={data_sent}")
     response = requests.post(
-        url, headers=headers, data=data_sent, timeout=DEFAULT_API_TIMEOUT, files=files
+        url,
+        headers=headers,
+        params=params,
+        data=data_sent,
+        timeout=DEFAULT_API_TIMEOUT,
+        files=files,
     )
 
     if response.status_code == http.HTTPStatus.UNPROCESSABLE_ENTITY:
diff --git a/simvue/client.py b/simvue/client.py
index 45f152c5..c69e6b3a 100644
--- a/simvue/client.py
+++ b/simvue/client.py
@@ -9,7 +9,6 @@
 import contextlib
 import json
 import logging
-import os
 import pathlib
 import typing
 import http
@@ -45,12 +44,9 @@
 def _download_artifact_to_file(
     artifact: Artifact, output_dir: pathlib.Path | None
 ) -> None:
-    try:
-        _file_name = os.path.basename(artifact.name)
-    except AttributeError:
-        _file_name = os.path.basename(artifact)
-    _output_file = (output_dir or pathlib.Path.cwd()).joinpath(_file_name)
-
+    _output_file = (output_dir or pathlib.Path.cwd()).joinpath(artifact.name)
+    # If this is a hierarchical structure being downloaded, need to create directories
+    _output_file.parent.mkdir(parents=True, exist_ok=True)
     with _output_file.open("wb") as out_f:
         for content in artifact.download_content():
             out_f.write(content)
@@ -565,9 +561,6 @@ def get_artifacts_as_files(
         run_id: str,
         category: typing.Literal["input", "output", "code"] | None = None,
         output_dir: pydantic.DirectoryPath | None = None,
-        startswith: str | None = None,
-        contains: str | None = None,
-        endswith: str | None = None,
     ) -> None:
         """Retrieve artifacts from the given run as a set of files
 
@@ -575,24 +568,20 @@ def get_artifacts_as_files(
         ----------
         run_id : str
             the unique identifier for the run
+        category : typing.Literal["input", "output", "code"] |
+            the type of files to retrieve
         output_dir : str | None, optional
             location to download files to, the default of None will download
             them to the current working directory
-        startswith : str, optional
-            only download artifacts with this prefix in their name, by default None
-        contains : str, optional
-            only download artifacts containing this term in their name, by default None
-        endswith : str, optional
-            only download artifacts ending in this term in their name, by default None
 
         Raises
         ------
         RuntimeError
             if there was a failure retrieving artifacts from the server
         """
-        _artifacts: typing.Generator[tuple[str, Artifact], None, None] = Artifact.get(
-            runs=json.dumps([run_id]), category=category
-        )  # type: ignore
+        _artifacts: typing.Generator[tuple[str, Artifact], None, None] = (
+            Artifact.from_run(run_id=run_id, category=category)
+        )
 
         with ThreadPoolExecutor(CONCURRENT_DOWNLOADS) as executor:
             futures = [
diff --git a/simvue/config/parameters.py b/simvue/config/parameters.py
index 472811f6..c6d65c93 100644
--- a/simvue/config/parameters.py
+++ b/simvue/config/parameters.py
@@ -21,19 +21,23 @@
 
 
 class ServerSpecifications(pydantic.BaseModel):
-    url: pydantic.AnyHttpUrl
-    token: pydantic.SecretStr
+    url: pydantic.AnyHttpUrl | None
+    token: pydantic.SecretStr | None
 
     @pydantic.field_validator("url")
     @classmethod
-    def url_to_api_url(cls, v: typing.Any) -> str:
+    def url_to_api_url(cls, v: typing.Any) -> str | None:
+        if not v:
+            return
         if f"{v}".endswith("/api"):
             return f"{v}"
         _url = URL(f"{v}") / "api"
         return f"{_url}"
 
     @pydantic.field_validator("token")
-    def check_token(cls, v: typing.Any) -> str:
+    def check_token(cls, v: typing.Any) -> str | None:
+        if not v:
+            return
         value = v.get_secret_value()
         if not (expiry := get_expiry(value)):
             raise AssertionError("Failed to parse Simvue token - invalid token form")
diff --git a/simvue/config/user.py b/simvue/config/user.py
index 931d2fa5..22357ce5 100644
--- a/simvue/config/user.py
+++ b/simvue/config/user.py
@@ -212,10 +212,10 @@ def fetch(
 
         _run_mode = mode or _config_dict["run"].get("mode") or "online"
 
-        if not _server_url:
+        if not _server_url and _run_mode != "offline":
             raise RuntimeError("No server URL was specified")
 
-        if not _server_token:
+        if not _server_token and _run_mode != "offline":
             raise RuntimeError("No server token was specified")
 
         _config_dict["server"]["token"] = _server_token
diff --git a/simvue/factory/dispatch/queued.py b/simvue/factory/dispatch/queued.py
index 6ebf5ff3..ae5b094e 100644
--- a/simvue/factory/dispatch/queued.py
+++ b/simvue/factory/dispatch/queued.py
@@ -21,7 +21,6 @@
 QUEUE_SIZE = 10000
 
 logger = logging.getLogger(__name__)
-logger.setLevel(logging.DEBUG)
 
 
 class QueuedDispatcher(threading.Thread, DispatcherBaseClass):
diff --git a/simvue/run.py b/simvue/run.py
index af7a5aa0..5bfda8b3 100644
--- a/simvue/run.py
+++ b/simvue/run.py
@@ -25,14 +25,13 @@
 import typing
 import warnings
 import uuid
-
+import randomname
 import click
 import psutil
 
-from simvue.api.objects.alert.base import AlertBase
 from simvue.api.objects.alert.fetch import Alert
-from simvue.api.objects.folder import Folder, get_folder_from_path
-from simvue.exception import ObjectNotFoundError, SimvueRunError
+from simvue.api.objects.folder import Folder
+from simvue.exception import SimvueRunError
 from simvue.utilities import prettify_pydantic
 
 
@@ -185,9 +184,13 @@ def __init__(
             if self._user_config.metrics.resources_metrics_interval < 1
             else self._user_config.metrics.resources_metrics_interval
         )
-        self._headers: dict[str, str] = {
-            "Authorization": f"Bearer {self._user_config.server.token.get_secret_value()}"
-        }
+        self._headers: dict[str, str] = (
+            {
+                "Authorization": f"Bearer {self._user_config.server.token.get_secret_value()}"
+            }
+            if mode != "offline"
+            else {}
+        )
         self._sv_obj: RunObject | None = None
         self._pid: int | None = 0
         self._shutdown_event: threading.Event | None = None
@@ -249,19 +252,12 @@ def _handle_exception_throw(
             else f"An exception was thrown: {_exception_thrown}"
         )
 
-        self.log_event(_event_msg)
-        self.set_status("terminated" if _is_terminated else "failed")
-
         # If the dispatcher has already been aborted then this will
         # fail so just continue without the event
         with contextlib.suppress(RuntimeError):
-            self.log_event(f"{_exception_thrown}: {value}")
+            self.log_event(_event_msg)
 
-        if not traceback:
-            return
-
-        with contextlib.suppress(RuntimeError):
-            self.log_event(f"Traceback: {traceback}")
+        self.set_status("terminated" if _is_terminated else "failed")
 
     def __exit__(
         self,
@@ -419,7 +415,9 @@ def _create_dispatch_callback(
         if self._user_config.run.mode == "online" and not self._id:
             raise RuntimeError("Expected identifier for run")
 
-        if not self._user_config.server.url or not self._sv_obj:
+        if (
+            self._user_config.run.mode != "offline" and not self._user_config.server.url
+        ) or not self._sv_obj:
             raise RuntimeError("Cannot commence dispatch, run not initialised")
 
         def _dispatch_callback(
@@ -465,12 +463,19 @@ def _start(self, reconnect: bool = False) -> bool:
 
         logger.debug("Starting run")
 
-        if self._sv_obj:
-            self._sv_obj.status = self._status
-            self._sv_obj.commit()
-
         self._start_time = time.time()
 
+        if self._sv_obj:
+            _changed = False
+            if self._sv_obj.status != "running":
+                self._sv_obj.status = self._status
+                _changed = True
+            if self._user_config.run.mode == "offline":
+                self._sv_obj.started = self._start_time
+                _changed = True
+            if _changed:
+                self._sv_obj.commit()
+
         if self._pid == 0:
             self._pid = os.getpid()
 
@@ -565,6 +570,7 @@ def init(
         folder: typing.Annotated[
             str, pydantic.Field(None, pattern=FOLDER_REGEX)
         ] = None,
+        notification: typing.Literal["none", "all", "error", "lost"] = "none",
         running: bool = True,
         retention_period: str | None = None,
         timeout: int | None = 180,
@@ -586,6 +592,9 @@ def init(
             description of the run, by default None
         folder : str, optional
             folder within which to store the run, by default "/"
+        notification: typing.Literal["none", "all", "error", "lost"], optional
+            whether to notify the user by email upon completion of the run if
+            the run is in the specified state, by default "none"
         running : bool, optional
             whether to set the status as running or created, the latter implying
             the run will be commenced at a later time. Default is True.
@@ -621,13 +630,10 @@ def init(
 
         self._term_color = not no_color
 
-        try:
-            self._folder = get_folder_from_path(path=folder)
-        except ObjectNotFoundError:
-            self._folder = Folder.new(
-                path=folder, offline=self._user_config.run.mode == "offline"
-            )
-            self._folder.commit()  # type: ignore
+        self._folder = Folder.new(
+            path=folder, offline=self._user_config.run.mode == "offline"
+        )
+        self._folder.commit()  # type: ignore
 
         if isinstance(visibility, str) and visibility not in ("public", "tenant"):
             self._error(
@@ -638,7 +644,9 @@ def init(
             self._error("invalid mode specified, must be online, offline or disabled")
             return False
 
-        if not self._user_config.server.token or not self._user_config.server.url:
+        if self._user_config.run.mode != "offline" and (
+            not self._user_config.server.token or not self._user_config.server.url
+        ):
             self._error(
                 "Unable to get URL and token from environment variables or config file"
             )
@@ -647,6 +655,8 @@ def init(
         if name and not re.match(r"^[a-zA-Z0-9\-\_\s\/\.:]+$", name):
             self._error("specified name is invalid")
             return False
+        elif not name and self._user_config.run.mode == "offline":
+            name = randomname.get_name()
 
         self._name = name
 
@@ -686,6 +696,9 @@ def init(
         self._sv_obj.tags = tags
         self._sv_obj.metadata = (metadata or {}) | git_info(os.getcwd()) | environment()
         self._sv_obj.heartbeat_timeout = timeout
+        self._sv_obj.alerts = []
+        self._sv_obj.created = time.time()
+        self._sv_obj.notifications = notification
 
         if self._status == "running":
             self._sv_obj.system = get_system()
@@ -714,7 +727,7 @@ def init(
                 fg="green" if self._term_color else None,
             )
             click.secho(
-                f"[simvue] Monitor in the UI at {self._user_config.server.url}/dashboard/runs/run/{self._id}",
+                f"[simvue] Monitor in the UI at {self._user_config.server.url.rsplit('/api', 1)[0]}/dashboard/runs/run/{self._id}",
                 bold=self._term_color,
                 fg="green" if self._term_color else None,
             )
@@ -1459,7 +1472,7 @@ def set_status(
     ) -> bool:
         """Set run status
 
-        status to assign to this run
+        status to assign to this run once finished
 
         Parameters
         ----------
@@ -1479,6 +1492,7 @@ def set_status(
 
         if self._sv_obj:
             self._sv_obj.status = status
+            self._sv_obj.endtime = time.time()
             self._sv_obj.commit()
             return True
 
@@ -1507,7 +1521,11 @@ def _tidy_run(self) -> None:
             self._dispatcher.purge()
             self._dispatcher.join()
 
-        if self._user_config.run.mode == "offline" and self._status != "created":
+        if (
+            self._sv_obj
+            and self._user_config.run.mode == "offline"
+            and self._status != "created"
+        ):
             self._user_config.offline.cache.joinpath(
                 "runs", f"{self._id}.closed"
             ).touch()
@@ -1631,49 +1649,25 @@ def add_alerts(
         if names and not ids:
             try:
                 if alerts := Alert.get(offline=self._user_config.run.mode == "offline"):
-                    for alert in alerts:
-                        if alert.name in names:
-                            ids.append(alert.id)
+                    ids += [id for id, alert in alerts if alert.name in names]
+                else:
+                    self._error("No existing alerts")
+                    return False
             except RuntimeError as e:
                 self._error(f"{e.args[0]}")
                 return False
-            else:
-                self._error("No existing alerts")
-                return False
         elif not names and not ids:
             self._error("Need to provide alert ids or alert names")
             return False
 
         # Avoid duplication
-        self._sv_obj.alerts = list(set(self._sv_obj.alerts + [ids]))
-        self._sv_obj.commit()
-
-        return False
-
-    def _attach_alert_to_run(self, alert: AlertBase) -> str | None:
-        # Check if the alert already exists
-        _alert_id: str | None = None
-
-        for _, _existing_alert in Alert.get(
-            offline=self._user_config.run.mode == "offline"
-        ):
-            if _existing_alert.compare(alert):
-                _alert_id = _existing_alert.id
-                logger.info("Existing alert found with id: %s", _existing_alert.id)
-                break
-
-        if not _alert_id:
-            alert.commit()
-            _alert_id = alert.id
-
-        self._sv_obj.alerts = [_alert_id]
-
+        _deduplicated = list(set(self._sv_obj.alerts + ids))
+        self._sv_obj.alerts = _deduplicated
         self._sv_obj.commit()
 
-        return _alert_id
+        return True
 
     @skip_if_failed("_aborted", "_suppress_errors", None)
-    @check_run_initialised
     @pydantic.validate_call
     def create_metric_range_alert(
         self,
@@ -1691,6 +1685,7 @@ def create_metric_range_alert(
         ] = "average",
         notification: typing.Literal["email", "none"] = "none",
         trigger_abort: bool = False,
+        attach_to_run: bool = True,
     ) -> str | None:
         """Creates a metric range alert with the specified name (if it doesn't exist)
         and applies it to the current run. If alert already exists it will
@@ -1720,6 +1715,8 @@ def create_metric_range_alert(
             whether to notify on trigger, by default "none"
         trigger_abort : bool, optional
             whether this alert can trigger a run abort, default False
+        attach_to_run : bool, optional
+            whether to attach this alert to the current run, default True
 
         Returns
         -------
@@ -1741,10 +1738,12 @@ def create_metric_range_alert(
             offline=self._user_config.run.mode == "offline",
         )
         _alert.abort = trigger_abort
-        return self._attach_alert_to_run(_alert)
+        _alert.commit()
+        if attach_to_run:
+            self.add_alerts(ids=[_alert.id])
+        return _alert.id
 
     @skip_if_failed("_aborted", "_suppress_errors", None)
-    @check_run_initialised
     @pydantic.validate_call
     def create_metric_threshold_alert(
         self,
@@ -1761,6 +1760,7 @@ def create_metric_threshold_alert(
         ] = "average",
         notification: typing.Literal["email", "none"] = "none",
         trigger_abort: bool = False,
+        attach_to_run: bool = True,
     ) -> str | None:
         """Creates a metric threshold alert with the specified name (if it doesn't exist)
         and applies it to the current run. If alert already exists it will
@@ -1788,6 +1788,8 @@ def create_metric_threshold_alert(
             whether to notify on trigger, by default "none"
         trigger_abort : bool, optional
             whether this alert can trigger a run abort, default False
+        attach_to_run : bool, optional
+            whether to attach this alert to the current run, default True
 
         Returns
         -------
@@ -1807,11 +1809,14 @@ def create_metric_threshold_alert(
             notification=notification,
             offline=self._user_config.run.mode == "offline",
         )
+
         _alert.abort = trigger_abort
-        return self._attach_alert_to_run(_alert)
+        _alert.commit()
+        if attach_to_run:
+            self.add_alerts(ids=[_alert.id])
+        return _alert.id
 
     @skip_if_failed("_aborted", "_suppress_errors", None)
-    @check_run_initialised
     @pydantic.validate_call
     def create_event_alert(
         self,
@@ -1822,6 +1827,7 @@ def create_event_alert(
         frequency: pydantic.PositiveInt = 1,
         notification: typing.Literal["email", "none"] = "none",
         trigger_abort: bool = False,
+        attach_to_run: bool = True,
     ) -> str | None:
         """Creates an events alert with the specified name (if it doesn't exist)
         and applies it to the current run. If alert already exists it will
@@ -1839,6 +1845,8 @@ def create_event_alert(
             whether to notify on trigger, by default "none"
         trigger_abort : bool, optional
             whether this alert can trigger a run abort
+        attach_to_run : bool, optional
+            whether to attach this alert to the current run, default True
 
         Returns
         -------
@@ -1855,10 +1863,12 @@ def create_event_alert(
             offline=self._user_config.run.mode == "offline",
         )
         _alert.abort = trigger_abort
-        return self._attach_alert_to_run(_alert)
+        _alert.commit()
+        if attach_to_run:
+            self.add_alerts(ids=[_alert.id])
+        return _alert.id
 
     @skip_if_failed("_aborted", "_suppress_errors", None)
-    @check_run_initialised
     @pydantic.validate_call
     def create_user_alert(
         self,
@@ -1867,6 +1877,7 @@ def create_user_alert(
         description: str | None = None,
         notification: typing.Literal["email", "none"] = "none",
         trigger_abort: bool = False,
+        attach_to_run: bool = True,
     ) -> None:
         """Creates a user alert with the specified name (if it doesn't exist)
         and applies it to the current run. If alert already exists it will
@@ -1882,6 +1893,8 @@ def create_user_alert(
             whether to notify on trigger, by default "none"
         trigger_abort : bool, optional
             whether this alert can trigger a run abort, default False
+        attach_to_run : bool, optional
+            whether to attach this alert to the current run, default True
 
         Returns
         -------
@@ -1896,7 +1909,10 @@ def create_user_alert(
             offline=self._user_config.run.mode == "offline",
         )
         _alert.abort = trigger_abort
-        return self._attach_alert_to_run(_alert)
+        _alert.commit()
+        if attach_to_run:
+            self.add_alerts(ids=[_alert.id])
+        return _alert.id
 
     @skip_if_failed("_aborted", "_suppress_errors", False)
     @check_run_initialised
diff --git a/simvue/utilities.py b/simvue/utilities.py
index 69a8ecd8..a5f40430 100644
--- a/simvue/utilities.py
+++ b/simvue/utilities.py
@@ -11,8 +11,8 @@
 import os
 import pathlib
 import typing
-
 import jwt
+from deepmerge import Merger
 
 from datetime import timezone
 from simvue.models import DATETIME_FORMAT
@@ -50,16 +50,17 @@ def find_first_instance_of_file(
     if isinstance(file_names, str):
         file_names = [file_names]
 
-    for root, _, files in os.walk(os.getcwd(), topdown=False):
-        for file_name in file_names:
-            if file_name in files:
-                return pathlib.Path(root).joinpath(file_name)
+    for file_name in file_names:
+        _user_file = pathlib.Path.cwd().joinpath(file_name)
+        if _user_file.exists():
+            return _user_file
 
     # If the user is running on different mounted volume or outside
     # of their user space then the above will not return the file
     if check_user_space:
         for file_name in file_names:
-            if os.path.exists(_user_file := pathlib.Path.home().joinpath(file_name)):
+            _user_file = pathlib.Path.home().joinpath(file_name)
+            if _user_file.exists():
                 return _user_file
 
     return None
@@ -357,7 +358,7 @@ def validate_timestamp(timestamp):
     Validate a user-provided timestamp
     """
     try:
-        datetime.datetime.strptime(timestamp, "%Y-%m-%d %H:%M:%S.%f")
+        datetime.datetime.strptime(timestamp, DATETIME_FORMAT)
     except ValueError:
         return False
 
@@ -395,3 +396,18 @@ def get_mimetype_for_file(file_path: pathlib.Path) -> str:
     """Return MIME type for the given file"""
     _guess, *_ = mimetypes.guess_type(file_path)
     return _guess or "application/octet-stream"
+
+
+# Create a new Merge strategy for merging local file and staging attributes
+staging_merger = Merger(
+    # pass in a list of tuple, with the
+    # strategies you are looking to apply
+    # to each type.
+    [(list, ["override"]), (dict, ["merge"]), (set, ["union"])],
+    # next, choose the fallback strategies,
+    # applied to all other types:
+    ["override"],
+    # finally, choose the strategies in
+    # the case where the types conflict:
+    ["override"],
+)
diff --git a/tests/functional/test_client.py b/tests/functional/test_client.py
index 3b6c6f24..37c1a1ae 100644
--- a/tests/functional/test_client.py
+++ b/tests/functional/test_client.py
@@ -145,12 +145,21 @@ def test_get_artifacts_as_files(
             create_test_run[1]["run_id"], category=category, output_dir=tempd
         )
         files = [os.path.basename(i) for i in glob.glob(os.path.join(tempd, "*"))]
-        if not category or category == "input":
-            assert create_test_run[1]["file_1"] in files
-        if not category or category == "output":
-            assert create_test_run[1]["file_2"] in files
-        if not category or category == "code":
-            assert create_test_run[1]["file_3"] in files
+        
+        if not category:
+            expected_files = ["file_1", "file_2", "file_3"]
+        elif category == "input":
+            expected_files = ["file_1"]
+        elif category == "output":
+            expected_files = ["file_2"]
+        elif category == "code":
+            expected_files = ["file_3"]
+            
+        for file in ["file_1", "file_2", "file_3"]:
+            if file in expected_files:
+                assert create_test_run[1][file] in files
+            else:
+                assert create_test_run[1][file] not in files
 
 
 @pytest.mark.dependency
diff --git a/tests/functional/test_dispatch.py b/tests/functional/test_dispatch.py
index de77ccb2..e2ab6362 100644
--- a/tests/functional/test_dispatch.py
+++ b/tests/functional/test_dispatch.py
@@ -67,9 +67,10 @@ def callback(___: list[typing.Any], _: str, args=check_dict, var=variable) -> No
     event.set()
 
     dispatcher.join()
+    time.sleep(0.1)
 
     for variable in variables:
-        assert check_dict[variable]["counter"] >= 2 if overload_buffer else 1, f"Check of counter for dispatcher '{variable}' failed with count = {check_dict[variable]['counter']}"
+        assert check_dict[variable]["counter"] >= (2 if overload_buffer else 1), f"Check of counter for dispatcher '{variable}' failed with count = {check_dict[variable]['counter']}"
     assert time.time() - start_time < time_threshold
 
 
diff --git a/tests/functional/test_run_class.py b/tests/functional/test_run_class.py
index 5de51a8a..b447659b 100644
--- a/tests/functional/test_run_class.py
+++ b/tests/functional/test_run_class.py
@@ -14,7 +14,7 @@
 import pathlib
 import concurrent.futures
 import random
-
+import datetime
 import simvue
 from simvue.api.objects.alert.fetch import Alert
 from simvue.exception import SimvueRunError
@@ -59,12 +59,14 @@ def test_run_with_emissions() -> None:
 
 
 @pytest.mark.run
+@pytest.mark.parametrize("timestamp", (datetime.datetime.now().strftime("%Y-%m-%dT%H:%M:%S.%f"), None), ids=("timestamp", "no_timestamp"))
 @pytest.mark.parametrize("overload_buffer", (True, False), ids=("overload", "normal"))
 @pytest.mark.parametrize(
     "visibility", ("bad_option", "tenant", "public", ["ciuser01"], None)
 )
 def test_log_metrics(
     overload_buffer: bool,
+    timestamp: str | None,
     setup_logging: "CountingLogHandler",
     mocker,
     request: pytest.FixtureRequest,
@@ -112,9 +114,9 @@ def test_log_metrics(
 
     if overload_buffer:
         for i in range(run._dispatcher._max_buffer_size * 3):
-            run.log_metrics({key: i for key in METRICS})
+            run.log_metrics({key: i for key in METRICS}, timestamp=timestamp)
     else:
-        run.log_metrics(METRICS)
+        run.log_metrics(METRICS, timestamp=timestamp)
     time.sleep(2.0 if overload_buffer else 1.0)
     run.close()
     client = sv_cl.Client()
@@ -220,9 +222,14 @@ def test_offline_tags(create_plain_run_offline: tuple[sv_run.Run, dict]) -> None
 
 @pytest.mark.run
 def test_update_metadata_running(create_test_run: tuple[sv_run.Run, dict]) -> None:
-    METADATA = {"a": 10, "b": 1.2, "c": "word"}
+    METADATA = {"a": 1, "b": 1.2, "c": "word", "d": "new"}
     run, _ = create_test_run
-    run.update_metadata(METADATA)
+    # Add an initial set of metadata
+    run.update_metadata({"a": 10, "b": 1.2, "c": "word"})
+    # Try updating a second time, check original dict isnt overwritten
+    run.update_metadata({"d": "new"})
+    # Try updating an already defined piece of metadata
+    run.update_metadata({"a": 1})
     run.close()
     time.sleep(1.0)
     client = sv_cl.Client()
@@ -234,9 +241,14 @@ def test_update_metadata_running(create_test_run: tuple[sv_run.Run, dict]) -> No
 
 @pytest.mark.run
 def test_update_metadata_created(create_pending_run: tuple[sv_run.Run, dict]) -> None:
-    METADATA = {"a": 10, "b": 1.2, "c": "word"}
+    METADATA = {"a": 1, "b": 1.2, "c": "word", "d": "new"}
     run, _ = create_pending_run
-    run.update_metadata(METADATA)
+    # Add an initial set of metadata
+    run.update_metadata({"a": 10, "b": 1.2, "c": "word"})
+    # Try updating a second time, check original dict isnt overwritten
+    run.update_metadata({"d": "new"})
+    # Try updating an already defined piece of metadata
+    run.update_metadata({"a": 1})
     time.sleep(1.0)
     client = sv_cl.Client()
     run_info = client.get_run(run.id)
@@ -250,13 +262,20 @@ def test_update_metadata_created(create_pending_run: tuple[sv_run.Run, dict]) ->
 def test_update_metadata_offline(
     create_plain_run_offline: tuple[sv_run.Run, dict],
 ) -> None:
-    METADATA = {"a": 10, "b": 1.2, "c": "word"}
+    METADATA = {"a": 1, "b": 1.2, "c": "word", "d": "new"}
     run, _ = create_plain_run_offline
     run_name = run._name
-    run.update_metadata(METADATA)
+    # Add an initial set of metadata
+    run.update_metadata({"a": 10, "b": 1.2, "c": "word"})
+    # Try updating a second time, check original dict isnt overwritten
+    run.update_metadata({"d": "new"})
+    # Try updating an already defined piece of metadata
+    run.update_metadata({"a": 1})
+
     sv_send.sender(os.environ["SIMVUE_OFFLINE_DIRECTORY"], 2, 10)
     run.close()
     time.sleep(1.0)
+    
     client = sv_cl.Client()
     run_info = client.get_run(client.get_run_id_from_name(run_name))
 
@@ -655,6 +674,29 @@ def test_update_tags_created(
     assert sorted(run_data.tags) == sorted(tags + ["additional"])
 
 
+@pytest.mark.offline
+@pytest.mark.run
+def test_update_tags_offline(
+    create_plain_run_offline: typing.Tuple[sv_run.Run, dict],
+) -> None:
+    simvue_run, _ = create_plain_run_offline
+    run_name = simvue_run._name
+    
+    simvue_run.set_tags(["simvue_client_unit_tests",])
+
+    simvue_run.update_tags(["additional"])
+    
+    sv_send.sender(os.environ["SIMVUE_OFFLINE_DIRECTORY"], 2, 10)
+    simvue_run.close()
+    time.sleep(1.0)
+
+    client = sv_cl.Client()
+    run_data = client.get_run(client.get_run_id_from_name(run_name))
+
+    time.sleep(1)
+    run_data = client.get_run(simvue_run._id)
+    assert sorted(run_data.tags) == sorted(["simvue_client_unit_tests", "additional"])
+    
 @pytest.mark.run
 @pytest.mark.parametrize("object_type", ("DataFrame", "ndarray"))
 def test_save_object(
@@ -676,6 +718,94 @@ def test_save_object(
         save_obj = array([1, 2, 3, 4])
     simvue_run.save_object(save_obj, "input", f"test_object_{object_type}")
 
+@pytest.mark.run
+def test_add_alerts() -> None:
+    _uuid = f"{uuid.uuid4()}".split("-")[0]
+
+    run = sv_run.Run()
+    run.init(
+        name="test_add_alerts",
+        folder="/simvue_unit_tests",
+        retention_period="1 min",
+        tags=["test_add_alerts"],
+        visibility="tenant"
+    )
+    
+    _expected_alerts = []
+    
+    # Create alerts, have them attach to run automatically
+    _id = run.create_event_alert(
+        name=f"event_alert_{_uuid}",
+        pattern = "test",
+    )
+    _expected_alerts.append(_id)
+    time.sleep(1)
+    # Retrieve run, check if alert has been added
+    _online_run = RunObject(identifier=run._id)
+    assert _id in _online_run.alerts
+    
+    # Create another alert and attach to run
+    _id = run.create_metric_range_alert(
+        name=f"metric_range_alert_{_uuid}",
+        metric="test",
+        range_low=10,
+        range_high=100,
+        rule="is inside range",
+    )
+    _expected_alerts.append(_id)
+    time.sleep(1)
+    # Retrieve run, check both alerts have been added
+    _online_run.refresh()
+    assert sorted(_online_run.alerts) == sorted(_expected_alerts)
+    
+    # Create another alert, do not attach to run
+    _id = run.create_metric_threshold_alert(
+        name=f"metric_threshold_alert_{_uuid}",
+        metric="test",
+        threshold=10,
+        rule="is above",
+        attach_to_run=False
+    )
+    time.sleep(1)
+    # Retrieve run, check alert has NOT been added
+    _online_run.refresh()
+    assert sorted(_online_run.alerts) == sorted(_expected_alerts)
+    
+    # Try adding all three alerts using add_alerts
+    _expected_alerts.append(_id)
+    run.add_alerts(names=[f"event_alert_{_uuid}", f"metric_range_alert_{_uuid}", f"metric_threshold_alert_{_uuid}"])
+    time.sleep(1)
+    
+    # Check that there is no duplication
+    _online_run.refresh()
+    assert sorted(_online_run.alerts) == sorted(_expected_alerts)
+    
+    # Create another run without adding to run
+    _id = run.create_user_alert(
+        name=f"user_alert_{_uuid}",
+        attach_to_run=False
+    )
+    time.sleep(1)
+    
+    # Check alert is not added
+    _online_run.refresh()
+    assert sorted(_online_run.alerts) == sorted(_expected_alerts)
+    
+    # Try adding alerts with IDs, check there is no duplication
+    _expected_alerts.append(_id)
+    run.add_alerts(ids=_expected_alerts)
+    time.sleep(1)
+    
+    _online_run.refresh()
+    assert sorted(_online_run.alerts) == sorted(_expected_alerts)
+    
+    run.close()
+    
+    client = sv_cl.Client()
+    client.delete_run(run._id)
+    for _id in _expected_alerts:
+        client.delete_alert(_id)
+
 
 @pytest.mark.run
 def test_abort_on_alert_process(mocker: pytest_mock.MockerFixture) -> None:
@@ -756,8 +886,8 @@ def testing_exit(status: int) -> None:
     run.add_process(identifier="forever_long", executable="bash", c="sleep 10")
     time.sleep(2)
     run.log_alert(alert_id, "critical")
-    _alert = Alert(identifier=alert_id)
     time.sleep(1)
+    _alert = Alert(identifier=alert_id)
     assert _alert.get_status(run.id) == "critical"
     counter = 0
     while run._status != "terminated" and counter < 15:
diff --git a/tests/unit/test_events.py b/tests/unit/test_events.py
index 205643e6..fb5d0587 100644
--- a/tests/unit/test_events.py
+++ b/tests/unit/test_events.py
@@ -7,6 +7,7 @@
 
 from simvue.api.objects import Events, Folder, Run
 from simvue.models import DATETIME_FORMAT
+from simvue.sender import sender
 
 @pytest.mark.api
 @pytest.mark.online
@@ -30,3 +31,39 @@ def test_events_creation_online() -> None:
     _run.delete()
     _folder.delete(recursive=True, delete_runs=True, runs_only=False)
 
+@pytest.mark.api
+@pytest.mark.offline
+def test_events_creation_offline() -> None:
+    _uuid: str = f"{uuid.uuid4()}".split("-")[0]
+    _folder_name = f"/simvue_unit_testing/{_uuid}"
+    _folder = Folder.new(path=_folder_name, offline=True)
+    _run = Run.new(folder=_folder_name, offline=True)
+    _folder.commit()
+    _run.commit()
+    _timestamp = datetime.datetime.now().strftime(DATETIME_FORMAT)
+    _events =   Events.new(
+        run=_run.id,
+        events=[
+            {"message": "This is a test!", "timestamp": _timestamp}
+        ],
+        offline=True
+    )
+    _events.commit()
+    with _events._local_staging_file.open() as in_f:
+        _local_data = json.load(in_f)
+        
+    assert _local_data.get("run") == _run.id
+    assert _local_data.get("events")[0].get("message") == "This is a test!"
+    assert _local_data.get("events")[0].get("timestamp") == _timestamp
+    
+    _id_mapping = sender(_events._local_staging_file.parents[1], 1, 10, ["folders", "runs", "events"])
+    time.sleep(1)
+    
+    # Get online version of events
+    _online_events = Events(_id_mapping.get(_events.id))
+    _event_content = next(_online_events.get(run_id=_id_mapping.get(_run.id)))
+    assert _event_content.message == "This is a test!"
+    assert _event_content.timestamp == _timestamp
+
+    _run.delete()
+    _folder.delete(recursive=True, delete_runs=True, runs_only=False)
\ No newline at end of file
diff --git a/tests/unit/test_metrics.py b/tests/unit/test_metrics.py
index d8432fc0..5d8b7575 100644
--- a/tests/unit/test_metrics.py
+++ b/tests/unit/test_metrics.py
@@ -6,6 +6,8 @@
 import uuid
 
 from simvue.api.objects import Metrics, Folder, Run
+from simvue.models import DATETIME_FORMAT
+from simvue.sender import sender
 
 @pytest.mark.api
 @pytest.mark.online
@@ -38,9 +40,60 @@ def test_metrics_creation_online() -> None:
     )
     assert _metrics.to_dict()
     _metrics.commit()
-    assert _metrics.get(metrics=["x", "y", "z"], xaxis="step")
+    assert _metrics.get(metrics=["x", "y", "z"], xaxis="step", runs=[_run.id])
     assert _metrics.span(run_ids=[_run.id])
     assert _metrics.names(run_ids=[_run.id])
     _run.delete()
     _folder.delete(recursive=True, delete_runs=True, runs_only=False)
 
+@pytest.mark.api
+@pytest.mark.offline
+def test_metrics_creation_offline() -> None:
+    _uuid: str = f"{uuid.uuid4()}".split("-")[0]
+    _folder_name = f"/simvue_unit_testing/{_uuid}"
+    _folder = Folder.new(path=_folder_name, offline=True)
+    _run = Run.new(name="hello", folder=_folder_name, offline=True)
+    _folder.commit()
+    _run.commit()
+    
+    _values = {
+        "x": 1,
+        "y": 2.0,
+        "z": True
+    }
+    _time: int = 1
+    _step: int = 1
+    _timestamp = datetime.datetime.now().strftime(DATETIME_FORMAT)
+    _metrics = Metrics.new(
+        run=_run.id,
+        metrics=[
+            {
+                "timestamp": _timestamp,
+                "time": _time,
+                "step": _step,
+                "values": _values,
+            }
+        ],
+        offline=True
+    )
+    _metrics.commit()
+    with _metrics._local_staging_file.open() as in_f:
+        _local_data = json.load(in_f)
+        
+    assert _local_data.get("run") == _run.id
+    assert _local_data.get("metrics")[0].get("values") == _values
+    assert _local_data.get("metrics")[0].get("timestamp") == _timestamp
+    assert _local_data.get("metrics")[0].get("step") == _step
+    assert _local_data.get("metrics")[0].get("time") == _time
+    
+    _id_mapping = sender(_metrics._local_staging_file.parents[1], 1, 10, ["folders", "runs", "metrics"])
+    time.sleep(1)
+    
+    # Get online version of metrics
+    _online_metrics = Metrics(_id_mapping.get(_metrics.id))
+    _data = _online_metrics.get(metrics=["x", "y", "z"], runs=[_id_mapping.get(_run.id)], xaxis="step")
+    assert sorted(_online_metrics.names(run_ids=[_id_mapping.get(_run.id)])) == sorted(_values.keys())
+    assert _data.get(_id_mapping.get(_run.id)).get('y')[0].get('value') == 2.0
+    assert _data.get(_id_mapping.get(_run.id)).get('y')[0].get('step') == 1
+    _run.delete()
+    _folder.delete(recursive=True, delete_runs=True, runs_only=False)
\ No newline at end of file
diff --git a/tests/unit/test_user_alert.py b/tests/unit/test_user_alert.py
index 71d08336..a819df15 100644
--- a/tests/unit/test_user_alert.py
+++ b/tests/unit/test_user_alert.py
@@ -191,13 +191,28 @@ def test_user_alert_status_offline() -> None:
     _run.alerts = [_alert.id]
     _run.commit()
 
-    sender(_alert._local_staging_file.parents[1], 1, 10, ["folders", "runs", "alerts"])
+    _id_mapping = sender(_alert._local_staging_file.parents[1], 1, 10, ["folders", "runs", "alerts"])
     time.sleep(1) 
+    
+    # Get online aler, check status is not set
+    _online_alert = UserAlert(_id_mapping.get(_alert.id))
+    assert not _online_alert.get_status(run_id=_id_mapping.get(_run.id))
 
     _alert.set_status(_run.id, "critical")
     _alert.commit()
-    import pdb; pdb.set_trace()
     time.sleep(1)
+    
+    # Check online status is still not set as change has not been sent
+    _online_alert.refresh()
+    assert not _online_alert.get_status(run_id=_id_mapping.get(_run.id))
+    
+    sender(_alert._local_staging_file.parents[1], 1, 10, ["alerts"])
+    time.sleep(1)
+    
+    # Check online status has been updated
+    _online_alert.refresh()
+    assert _online_alert.get_status(run_id=_id_mapping.get(_run.id)) == "critical"
+
     _run.delete()
     _folder.delete(recursive=True, runs_only=False, delete_runs=True)
     _alert.delete()