Merge branch 'release/doc'

Author: cnheider

.gitattributes

@@ -114,4 +114,4 @@
 *.pdf  filter=lfs diff=lfs merge=lfs -text
 
 # Disabled
-docs/**/* -filter=lfs -diff=lfs -merge=lfs -text
+# docs/**/* -filter=lfs -diff=lfs -merge=lfs -text

.github/images/flatbuffers.svg

@@ -6,9 +6,8 @@
 import sys
 from collections import namedtuple
 
-from setup import NeodroidPackage
-
 import neodroid
+from setup import NeodroidPackage
 
 PY3 = sys.version_info >= (3, 0)
 

.github/images/python.svg

@@ -5,4 +5,4 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v1
-      - uses: cnheider/postdoc@master
+      - uses: pything/postdoc@master

.github/utilities/collect_env.py

@@ -12,10 +12,10 @@ jobs:
     runs-on: ubuntu-18.04
     steps:
       - uses: actions/checkout@master
-      - name: Set up Python 3.7
+      - name: Set up Python 3.8
         uses: actions/setup-python@v1
         with:
-          python-version: 3.7
+          python-version: 3.8
       - name: Install pep517
         run: >-
               python -m
@@ -31,15 +31,19 @@ jobs:
               --out-dir dist/
               .
       - name: Publish distribution 📦 to Test PyPI
-        if: endsWith(github.ref, 'master')
+        env:
+          test_pypi_password: ${{ secrets.test_pypi_secret }}
+        if: env.test_pypi_password != null && endsWith(github.ref, 'master') && github.repository_owner == 'sintefneodroid'
         uses: pypa/gh-action-pypi-publish@master
         with:
-          password: ${{ secrets.test_pypi_password }}
+          password: ${{ secrets.test_pypi_secret }}
           repository_url: https://test.pypi.org/legacy/
       - name: Publish distribution 📦 to PyPI
-        if: startsWith(github.ref, 'refs/tags')
+        env:
+          pypi_password: ${{ secrets.pypi_secret }}
+        if: env.pypi_password != null && startsWith(github.ref, 'refs/tags') && github.repository_owner == 'sintefneodroid'
         uses: pypa/gh-action-pypi-publish@master
         with:
-          password: ${{ secrets.pypi_password }}
+          password: ${{ secrets.pypi_secret }}
           #verbose: true
           #skip_existing: true

.github/workflows/on_push.yml

@@ -0,0 +1,44 @@
+name: Python package
+
+on: [ push ]
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    strategy:
+      max-parallel: 4
+      matrix:
+        python-version: [  3.8 ]
+
+    steps:
+      - uses: actions/checkout@v2
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v2
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install -r requirements.txt
+          pip install -r requirements/requirements_dev.txt
+          pip install -r requirements/requirements_tests.txt
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install flake8 pytest
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+      - name: Install package
+        run: |
+          pip install -e .[test]
+      - name: Lint with flake8
+        run: |
+          pip install flake8
+          # stop the build if there are Python syntax errors or undefined names
+          flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+          # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+          flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+      - name: Test with pytest
+        run: |
+          pip install pytest
+          pytest

.github/workflows/publish-to-test-pypi.yml

@@ -125,5 +125,4 @@ logs/*.csv
 
 
 pip-wheel-metadata
-.pytest_cache
 build/

.github/workflows/pythonpackage.yml

@@ -1,6 +1,31 @@
+fail_fast: true
 repos:
   - repo: https://github.com/ambv/black
-    rev:  stable
+    rev:  22.6.0
     hooks:
       - id:               black
-        language_version: python3.7
+        language_version: python3.8
+  - repo: local
+    hooks:
+      - id:             pytest-check
+        name:           pytest-check
+        entry:          pytest
+        language:       system
+        pass_filenames: false
+        always_run:     true
+  - repo: local
+    hooks:
+      - id: flake8-check1 # stop the build if there are Python syntax errors or undefined names
+        name: flake8-check1
+        entry: flake8 neodroid --count --select=E9,F63,F7,F82 --show-source --statistics --exclude=*exclude*
+        language: system
+        pass_filenames: false
+        always_run: true
+  - repo: local
+    hooks:
+      - id: flake8-check2  # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+        name: flake8-check2
+        entry: flake8 neodroid --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics --exclude=*exclude*
+        language: system
+        pass_filenames: false
+        always_run: true

.gitignore

@@ -0,0 +1,29 @@
+# .readthedocs.yaml
+# Read the Docs configuration file
+# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details
+
+# Required
+version: 2
+
+# Set the version of Python and other tools you might need
+build:
+  os: ubuntu-20.04
+  tools:
+    python: "3.9"
+    # You can also specify other tool versions:
+    # nodejs: "16"
+    # rust: "1.55"
+    # golang: "1.17"
+
+# Build documentation in the docs/ directory with Sphinx
+sphinx:
+   configuration: docs/source/conf.py
+
+# If using Sphinx, optionally build your docs in additional formats such as PDF
+# formats:
+#    - pdf
+
+# Optionally declare the Python requirements required to build your docs
+python:
+   install:
+   - requirements: requirements/requirements_dev.txt