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Create test_panel_operations_notes.md
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‎sphinx/server_management/test_panel_operations_notes.md

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# Test-Panel Operation Notes
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view nginx file
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```bash
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docker exec -it specify7-test-panel-panel-1 cat /home/node/nginx.conf.d/nginx.conf
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```
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or
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```bash
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docker exec -it specify7-test-panel-panel-1 cat /etc/nginx/conf.d/servers/nginx.conf
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```
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or
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```bash
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sudo vim /var/lib/docker/volumes/specify7-test-panel_nginx-conf/_data/nginx.conf
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```
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view currently deployed docker-compose.yml
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```bash
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docker exec -it specify7-test-panel-panel-1 cat /home/node/state/docker-compose.yml
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```
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or
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```bash
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sudo vim /var/lib/docker/volumes/specify7-test-panel_state/_data/docker-compose.yml
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```
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view current instance configuration
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```bash
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docker exec -it specify7-test-panel-panel-1 cat /home/node/state/configuration.json
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```
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or
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```bash
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sudo vim /var/lib/docker/volumes/specify7-test-panel_state/_data/configuration.json
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```
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Fix SSL cert problem
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```bash
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cp -r test.specifysystems.org-0001/ test.specifysystems.org/
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```
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or
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```bash
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sudo cp -r /etc/letsencrypt/live/test.specifysystems.org-0001/
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```
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`/etc/letsencrypt/live/test.specifysystems.org/`
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Docker build
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```
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sudo docker compose \
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-f docker-compose.yml \
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-f docker-compose.production.yml \
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up --no-start --build
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```
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or
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```
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sudo docker compose \
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-f docker-compose.yml \
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-f docker-compose.production.yml \
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build
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```
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Docker run
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```
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sudo docker compose \
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-f docker-compose.yml \
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-f docker-compose.production.yml \
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-f /var/lib/docker/volumes/specify7-test-panel_state/_data/docker-compose.yml \
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up --remove-orphans -d
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```
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Restart
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```
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sudo docker compose down; sudo docker compose -f docker-compose.yml -f docker-compose.production.yml -f /var/lib/docker/volumes/specify7-test-panel_state/_data/docker-compose.yml up --remove-orphans -d
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```
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Docker stop
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```bash
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sudo docker stop $(sudo docker ps --all -q)
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```
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Full stop, rebuild, and restart
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```bash
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sudo docker stop $(sudo docker ps --all -q);
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sudo docker rm $(sudo docker ps --all -q);
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sudo docker compose \
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-f docker-compose.yml \
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-f docker-compose.production.yml \
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up --no-start --build;
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sudo docker compose \
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-f docker-compose.yml \
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-f docker-compose.production.yml \
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-f /var/lib/docker/volumes/specify7-test-panel_state/_data/docker-compose.yml \
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up --remove-orphans -d;
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```
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full stop and restart without rebuild
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```bash
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sudo docker compose down;
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sudo docker stop $(sudo docker ps --all -q);
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sudo docker rm $(sudo docker ps --all -q);
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sudo docker compose \
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-f docker-compose.yml \
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-f docker-compose.production.yml \
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-f /var/lib/docker/volumes/specify7-test-panel_state/_data/docker-compose.yml \
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up --remove-orphans -d;
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```
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Check SPECIFY_THICK_CLIENT
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```
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docker exec -it specify7-test-panel-geo20241205-production-2-1 bash
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ve/bin/python manage.py shell
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from django.conf import settings
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settings.SPECIFY_THICK_CLIENT
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```
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or
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```bash
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docker exec specify7-test-panel-_-1 ve/bin/python -c "from django.conf import settings; print(settings.SPECIFY_THICK_CLIENT)"
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```
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```bash
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docker exec -it specify7-test-panel-<_name>-1 ve/bin/python -c "from django.conf import settings; import; if os.path.exists('/opt/specify7/config') : settings.SPECIFY_THICK_CLIENT='/opt/specify7')
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```
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```bash
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#!/bin/bash
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# Get all running container names
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all_containers=$(docker ps --format "{{.Names}}")
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# Filter out unwanted containers
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filtered_containers=$(echo "$all_containers" | grep -vE '(panel-panel|redis|nginx)')
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# Loop through filtered containers and execute the command
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while IFS= read -r container_name; do
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echo "Processing container: $container_name"
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# Execute the command inside the container using multiline syntax
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docker exec $container_name ve/bin/python <<EOF
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from django.conf import settings
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import os
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if os.path.exists('/opt/specify7/config'):
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settings.SPECIFY_THICK_CLIENT = '/opt/specify7'
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EOF
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echo "Finished processing $container_name"
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done <<< "$filtered_containers"
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echo "All containers processed."
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```
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SSL renewal (not sure yet) - need to get 'etc/letsencrypt/live/test.specifysystems.org' directory to match /etc/letsencrypt/live/test.specifysystems.org-0001
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```bash
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ls -la /etc/letsencrypt/live/test.specifysystems.org;
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ls -la /etc/letsencrypt/live/test.specifysystems.org-0001;
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ls -la /etc/letsencrypt/archive/test.specifysystems.org-0001;
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sudo rm /etc/letsencrypt/live/test.specifysystems.org-0001/fullchain.pem;
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sudo ln -s /etc/letsencrypt/archive/test.specifysystems.org-0001/fullchain6.pem /etc/letsencrypt/live/test.specifysystems.org-0001/fullchain.pem;
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sudo rm /etc/letsencrypt/live/test.specifysystems.org-0001/privkey.pem;
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sudo ln -s /etc/letsencrypt/archive/test.specifysystems.org-0001/privkey6.pem /etc/letsencrypt/live/test.specifysystems.org-0001/privkey.pem;
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sudo rm /etc/letsencrypt/live/test.specifysystems.org-0001/chain.pem;
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sudo ln -s /etc/letsencrypt/archive/test.specifysystems.org-0001/chain6.pem chain.pem;
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sudo rm /etc/letsencrypt/live/test.specifysystems.org-0001/cert.pem;
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sudo ln -s /etc/letsencrypt/archive/test.specifysystems.org-0001/cert6.pem cert.pem;
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docker exec -it specify7-test-panel-nginx-1 nginx -s reload;
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```
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```bash
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# Change the ssl files nginx points to
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sudo ln -sf /etc/letsencrypt/archive/test.specifysystems.org-0001/cert6.pem /etc/letsencrypt/live/test.specifysystems.org/cert.pem;
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sudo ln -sf /etc/letsencrypt/archive/test.specifysystems.org-0001/chain6.pem /etc/letsencrypt/live/test.specifysystems.org/chain.pem;
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sudo ln -sf /etc/letsencrypt/archive/test.specifysystems.org-0001/fullchain6.pem /etc/letsencrypt/live/test.specifysystems.org/fullchain.pem;
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sudo ln -sf /etc/letsencrypt/archive/test.specifysystems.org-0001/privkey6.pem /etc/letsencrypt/live/test.specifysystems.org/privkey.pem;
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docker exec -it specify7-test-panel-nginx-1 nginx -s reload;
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```
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### Check instance migration state
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find container name
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`docker stats --no-stream`
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bash into container
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`docker exec -it <container_name> bash`
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see migration state
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`ve/bin/python manage.py showmigrations`
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# Test static file access for an instance
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Create test config file for an instance:
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```bash
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touch config/test.txt;
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echo "Testing" > config/test.txt;
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```
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request:
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```bash
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curl https://ojsmnh110242024prod-production.test.specifysystems.org/static/config/icons_datamodel.xml
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curl https://ojsmnh110242024prod-production.test.specifysystems.org/static/config/test.txt
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curl https://ojsmnh110242024prod-production.test.specifysystems.org/static/config/geology/geology.views.xml
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curl https://sandbox-rbge.specifycloud.org/context/view.json?name=CollectionObjectGroup
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```
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test config
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```
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ve/bin/python manage.py shell
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from django.conf import settings
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settings.SPECIFY_CONFIG_DIR
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```
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view all django. settings
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```python
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from django.conf import settings; print("\n".join(f"{setting}: {getattr(settings, setting)}" for setting in dir(settings) if setting.isupper()))
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```
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```bash
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ve/bin/python manage.py shell -c 'from django.conf import settings; print("\n".join(f"{setting}: {getattr(settings, setting)}" for setting in dir(settings) if setting.isupper()))'
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```
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vim command
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```
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%s/THICK_CLIENT_LOCATION/SPECIFY_CONFIG_DIR/g
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%s/volumes:\n\s\s\s\s\s\s\n/volumes:\n\s\s\s\s\n/g
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```

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