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base repository: subond/CESM_postprocessing
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Commits on Mar 27, 2017

  1. bug fix to copy plots to correct web subdirs

    @bertinia
    bertinia committed Mar 27, 2017
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  2. Merge pull request NCAR#67 from bertinia/master 

    bug fix to copy atm diag plots to correct web subdirs
    @bertinia
    bertinia authored Mar 27, 2017
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Commits on Apr 8, 2017

  1. update to allow TIMESERIES_GENERATE_ALL option in env_postprocess.xml… 

    … to override settings in env_timeseries.xml; set MODEL_VS_CONTROL option in ocean diags to FALSE by default; round the CISM time value in the chunking code to avoid boundary problems.
    @bertinia
    bertinia committed Apr 8, 2017
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  2. Merge branch 'master' of github.com:NCAR/CESM_postprocessing

    @bertinia
    bertinia committed Apr 8, 2017
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  3. add tool to count number of timeseries variables in a directory using… 

    … ls -1 > time_series_vars.txt
    @bertinia
    bertinia committed Apr 8, 2017
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  4. Merge branch 'master' of https://github.com/bertinia/CESM_postprocessing

    @bertinia
    bertinia committed Apr 8, 2017
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  5. Merge pull request NCAR#68 from bertinia/master 

    bug fixes and enhancements
    @bertinia
    bertinia authored Apr 8, 2017
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Commits on Apr 24, 2017

  1. Squashed 'mpi_utils/pyTools/' changes from dcacb8b..b9ffae4 

    b9ffae4 Merge pull request NCAR#12 from NCAR/devel
3cb063a Updating README
8d1965c Removing NumPy dependency.  Not absolutely needed.
6a7373d Adding NumPy dependence.
4ce4262 Updating change log
59979fd Fixing tests to work with Python3 (no hanging)
b98c611 Appropriate list conversions to work with Python3
17dfc87 Importing print_function from future
47286c4 Correcting test to work (still) with Python2.6
49204eb Updating vprinter to work with Python3
f5a5957 Updating time-keeper tests to Python3
28a1d50 Updating SimpleComm code to work with Python3.  Seems to be hanging...
31e1447 Updating partition code to work with Python3
cb384db Suppressing Eclipse warnings
c082f73 Adding back import.  Was used, just not observed by Eclipse.
d5d7a61 Removing unused import
a548305 Bump version number
5b3cc56 Updating change log.  Reversing order.

git-subtree-dir: mpi_utils/pyTools
git-subtree-split: b9ffae42dee7d40bd8796eadf6f51c11128330a8
    @bertinia
    bertinia committed Apr 24, 2017
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  2. Merge commit '523a7241e9d53fa9a2b7d40efccc10840b82717f'

    @bertinia
    bertinia committed Apr 24, 2017
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  3. Merge commit 'b3d29ca3413277cfe4dd3a88c2507000a325a21b'

    @bertinia
    bertinia committed Apr 24, 2017
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  4. Squashed 'reshaper/pyReshaper/' changes from 944ab10..769e587 

    769e587 Merge pull request NCAR#29 from NCAR/devel
95fcbe6 Merge pull request NCAR#28 from NCAR/chunking
7f1ebbb Adding ability to produce speedup plots
1a81993 Add ability to plot log plots and subselected jobs by data
4d65341 Adding functionality to plot log bar plots
17337ab Merge branch 'chunking' of https://github.com/NCAR/PyReshaper into chunking
f5716ae Formatting only.
db18732 New YS 8x16 (128 proc) timings.
8a27c17 New timings for 4x4 YS runs.
f0ceb7e BUGFIX:  Wrong checks when generating plots.  Also resizing.
7a69d4e New Yellowstone timing numbers.
d4cd015 Merge branch 'chunking' of https://github.com/NCAR/PyReshaper into chunking
5f366c1 Changing pop-0.1deg chunking to fit in yellowstone memory.
7f33829 Adding to change log.
883eeab Adding chunking documentation to manual
738d310 Bumping up pop-0.1deg chunk size
1d4598a Copying version 0.X timings into new database for comparisons
1d612ba Renaming new timings database to default name
b960ddc Renaming old timings file to match old version
c691b15 New timings database for new PyReshaper version
27b420c Changing to indicate read chunk sizes only (write are same)
b8e49e2 Attempt to adjust chunk sizes.
81b0223 Merge branch 'chunking' of https://github.com/NCAR/PyReshaper into chunking
66ca398 Set camfv-1deg chunk sizes to none (read/write whole variables)
e635b00 Merge branch 'chunking' of https://github.com/NCAR/PyReshaper into chunking
57b2fe6 Moving sync location in convert
82395f5 BUGFIX: Wrong capitalization when attempting to call getdb()
5627dca Adding a message about the chunk sizes used.
47109f1 Fixing typo in warning message
4eed760 Adding chunking parameters to testinfo database.
b84c7ad Merge pull request NCAR#27 from NCAR/devel
fb809a4 BUGFIX: Datatype must be converted to a numpy dtype
c3c204c Revert "Working on updating to Python3"
0de3b37 Revert "Updating IOBackend tests to work with Python 2.6+"
3a3f1d8 Revert "Updating to work with Python2.6+"
2f0fc2c Revert "Updating to work with Python2.6+"
66374d9 Updating to work with Python2.6+
a8f0fc2 Updating to work with Python2.6+
232406a Updating IOBackend tests to work with Python 2.6+
549ddf9 Working on updating to Python3
3350d71 Simplifying chunking argument parsing
f703b59 Suppressing PyDev error
82cbcc0 Cleanup and passing in chunks to Reshaper convert method
48b4740 Enabling chunking via command-line script
17e98ad Adding ability to create new timings file at runtime.
3556e9b Adding ability to read/write separate timings files
62d0173 Removing NetCDF compare tool.  Try to use cprnc.
d413515 Adding pretty-print to output
8b3c256 Allowing backwards-compatibility with older netCDF4
b34445f Removing conflict with parser's help option
93ab872 One more modification
59155ad Making the script executable from the command line
ae172ca Adding a NetCDF compare tool
533756b Merge branch 'devel' of https://github.com/NCAR/PyReshaper into devel
e5ed2ac Adding module load to init and ignoring results directory.
68a3e3c Bugfix.  Need to set default chunking after unlimited dim is found.
d1c4edd Some cleanup and restructuring.
4343273 First pass at actual chunking code
5a07d3a Not printing 'usage'.  Printing 'use'.
a66c288 Merge pull request NCAR#25 from NCAR/memory_diag
af921ec Adding maximum memory usage diagnostic output
04ff328 Merge pull request NCAR#24 from NCAR/extract_only
df9e99c Updated changelog file.  No more dates.  Reverse order.
a2c3e47 Updating the manual to describe the new extract-only features
f31a7a0 Adding command-line option to extract only some time-series variables
c3d06e8 Extract only some variables seems to work from Python side.
79af819 Checking extract_only tests.  Appears to work, but needs more testing.
58eeb21 Updating specification tests to include time-series name list
13578d2 Updated GitHub references
2567496 First pass as modifying reshaper to use explicit time-series name list
031cfda Modifying specification to take time-series name list
7f7fa13 Merge pull request NCAR#23 from NCAR/default_1D_metadata
b4ec088 Updating manual for new feature
c87bafc Finished adding option to assert all 1d time-var variables are metadata
568d534 Cleanup:  Better allowances for netCDF4-python v1.1.1
95aaf34 attempting to add netCDF4 v1.1.1 support
38ab628 Updating bakeoff data location on GLADE
9f55a5e Need to repr the wmode argument when writing script (must be str)
f78f002 Bugfix
670edfa Backporting checkresults to Python 2.6
cc0a772 Bugfix:  more specfile extension changing
cbed5cd Bugfix:  specfile has extension s2s
38fef51 bugfix
f1de114 Bugfix and changing usage statements
cf29b54 More formatting of descriptions
601081d Updating descriptions of test utilities
dbff464 Backporting YS tests to Python version 2.6
fed167e Merge pull request NCAR#22 from NCAR/iobackend
7aa5477 Updating README to be consistent with manual.
12aa9e3 Updating CHANGELOG
44823f9 Updating user documentation
0a8d18b Updating comments only.
f5e7ad7 Modifying CHANGES log
f3b6041 Formatting only.
a38aa2a Updating changelog.
6eab81b Cleaning up iobackend branch, allowing I/O backend to be set by default
f762a67 Moved I/O backend info output to initialization
69548a0 More output about the NetCDF output settings.
7b0f71b Allowing the use of Python 2.6 ordereddict module, if available
6cd1d9f Changing the default backend to PyNIO (tests suggest it's faster)
74e497c Removing unnecessary import
915bf1c Updating tests with new names
469a0e0 Implementing use of new get_value/assign_value functions
b557895 Adding get_value and assign_value methods for general get/set
e26ffb1 Attempting to convert typecode 'S' to 'c' when using PyNIO
e8bd27a Casting datatype to string in Nio create_variable
d82aacc Adding user-level output on which I/O backend is being used.
9cdad55 Adding option for I/O backend to s2smake (stored in specfile)
562f6c4 Updating to new iobackend changes
6df401a Removing debug output. Changing 'typecode' str to 'datatype' Numpy.dtype
19ced93 More debugging info.
0634559 Adding debug output.
ee97a88 Switching PyReshaper objects over to new iobackend
dae810d Adding specifier checks on backend
49c081f Adding shape and size methods to NCVariable
3ed54aa Adding append tests.  All tests pass.
8b72ef5 Added write tests.  All are passing.
7c56210 Cleaned up API.  Switched to netCDF4 way of dealing with attributes.
0c3cfd8 Now adding iobackend and tests.
43cc6d8 Updated copyright info.  Added iobackend module and started tests.
2257386 Removing MultiSpecReshaper reference from factory function
18b5359 Removing MultiSpecReshaper
139f708 Starting work on new memory-management system/partitioner

git-subtree-dir: reshaper/pyReshaper
git-subtree-split: 769e587dabe15c0ecaf4d0c2903152a12ae640ce
    @bertinia
    bertinia committed Apr 24, 2017
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Commits on Apr 25, 2017

  1. update cheyenne to use mpi4py/2.0.0-mpt native SGI mpt

    @bertinia
    bertinia committed Apr 25, 2017
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  2. Merge pull request NCAR#70 from bertinia/master 

    updates for cheyenne and full SGI MPT support
    @bertinia
    bertinia authored Apr 25, 2017
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  3. remove commented out modules for cheyenne

    @bertinia
    bertinia committed Apr 25, 2017
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  4. Merge pull request NCAR#72 from bertinia/master 

    remove commented out modules for cheyenne
    @bertinia
    bertinia authored Apr 25, 2017
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Commits on Apr 26, 2017

  1. initial commit of land-ice diagnostics addition to the land diagnosti… 

    …cs set
    @bertinia
    bertinia committed Apr 26, 2017
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Commits on Apr 27, 2017

  1. update for land-ice diags to correctly generate sets 10 and 11

    @bertinia
    bertinia committed Apr 27, 2017
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Commits on May 1, 2017

  1. bug fixes merged from Keith O. sandbox

    @bertinia
    bertinia committed May 1, 2017
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  2. Merge pull request NCAR#80 from bertinia/master 

    addition of land-ice diagnostics to lnd_diag
    @bertinia
    bertinia authored May 1, 2017
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  3. add back in ocn za makefile

    @bertinia
    bertinia committed May 1, 2017
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  4. Merge pull request NCAR#81 from bertinia/master 

    add back in ocn za makefile
    @bertinia
    bertinia authored May 1, 2017
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Commits on May 12, 2017

  1. Bug fixes and upgrades

    @olyson
    olyson committed May 12, 2017
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  2. Merge 1

    @olyson
    olyson committed May 12, 2017
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Commits on May 15, 2017

  1. Merge pull request NCAR#82 from olyson/master 

    land diagnostics - Add variables to sets and fix bugs
    @bertinia
    bertinia authored May 15, 2017
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  2. update to cheyenne specific machine settings to always use the regula… 

    …r queue
    @bertinia
    bertinia committed May 15, 2017
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  3. Merge branch 'master' of github.com:NCAR/CESM_postprocessing

    @bertinia
    bertinia committed May 15, 2017
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  4. Merge pull request NCAR#83 from bertinia/master 

    update the machine_postprocess.xml for cheyenne
    @bertinia
    bertinia authored May 15, 2017
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Commits on May 17, 2017

  1. Update README.md

    @bertinia
    bertinia authored May 17, 2017
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Commits on May 18, 2017

  1. bug fix for ocn_diag_generator; update config default settings

    @bertinia
    bertinia committed May 18, 2017
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  2. Merge pull request NCAR#84 from bertinia/master 

    bug fix for ocn_diag_generator; update config default settings
    @bertinia
    bertinia authored May 18, 2017
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Commits on Jun 26, 2017

  1. update for cheyenne batch option

    @bertinia
    bertinia committed Jun 26, 2017
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Commits on Jun 27, 2017

  1. add more file streams for timeseries; fix memory leak in chunking; ap… 

    …pend to ts_status.log and add datetime stamp to the end of log filenames
    @bertinia
    bertinia committed Jun 27, 2017
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  2. Merge pull request NCAR#87 from bertinia/master 

    bug fixes for timeseries
    @bertinia
    bertinia authored Jun 27, 2017
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Commits on Jul 11, 2017

  1. fixes for issues NCAR#92, NCAR#89, and NCAR#88

    @bertinia
    bertinia committed Jul 11, 2017
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  2. Merge pull request NCAR#93 from bertinia/master 

    fixes for issues NCAR#92, NCAR#89, and NCAR#88
    @bertinia
    bertinia authored Jul 11, 2017
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Commits on Aug 7, 2017

  1. Squashed 'ilamb/' content from commit fd7f71b 

    git-subtree-dir: ilamb
git-subtree-split: fd7f71b7d7c8c778ddcc99b648b1886bb9564c8c
    @bertinia
    bertinia committed Aug 7, 2017
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  2. Merge commit '012d2789bcd0d700ac10fbc7d44053be6ce4bd99' as 'ilamb'

    @bertinia
    bertinia committed Aug 7, 2017
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  3. remove ilamb subtree

    @bertinia
    bertinia committed Aug 7, 2017
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  4. Merge commit '5b0d61dfa2b9c3ab9ccdbcfbcea2a298df603b04' as 'ilamb/ilamb'

    @bertinia
    bertinia committed Aug 7, 2017
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  5. Squashed 'ilamb/ilamb/' content from commit fd7f71b 

    git-subtree-dir: ilamb/ilamb
git-subtree-split: fd7f71b7d7c8c778ddcc99b648b1886bb9564c8c
    @bertinia
    bertinia committed Aug 7, 2017
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  6. initial add of ILAMB subtree package and integration into cesm-env2 v… 

    …irtualenv
    @bertinia
    bertinia committed Aug 7, 2017
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Commits on Aug 25, 2017

  1. switch pyReshaper backend default to netCDF4 instead of pyNio

    @bertinia
    bertinia committed Aug 25, 2017
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  2. updates for ilamb subtree inclusion

    @bertinia
    bertinia committed Aug 25, 2017
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  3. updates for ilamb subtree inclusion

    @bertinia
    bertinia committed Aug 25, 2017
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  4. Merge branch 'master' of https://github.com/bertinia/CESM_postprocessing

    @bertinia
    bertinia committed Aug 25, 2017
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  5. Merge pull request NCAR#94 from bertinia/master 

    initial add of ILAMB diagnostics package; set default reshaper backend to netCDF4
    @bertinia
    bertinia authored Aug 25, 2017
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Commits on Aug 28, 2017

  1. Add variables and bug fixes

    @olyson
    olyson committed Aug 28, 2017
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  2. Merge branch 'master' of https://github.com/NCAR/CESM_postprocessing

    @olyson
    olyson committed Aug 28, 2017
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  3. Merge pull request NCAR#95 from olyson/master 

    New Variables and Bug Fixes for Land Diagnostics
    @bertinia
    bertinia authored Aug 28, 2017
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Commits on Aug 30, 2017

  1. lnd diag set_7 river plot updates for the case where rof variables ar… 

    …e in the clm history files rather than on separate rtm or mosart files
    @bertinia
    bertinia committed Aug 30, 2017
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Showing 642 changed files with 49,586 additions and 60,167 deletions.
20 changes: 16 additions & 4 deletions .gitignore
View file
Original file line number Diff line number Diff line change
@@ -8,10 +8,21 @@
# Ignore python egg-info files
*.egg-info/

# Ignore externals brought in with manage_externals
averager/pyAverager
ilamb/ilamb
reshaper/pyReshaper
conformer/conformer
mpi_utils/pyTools
ocean_remap/ocean_remap

# Ignore python build and dist dirs
averager/pyAverager/build/
mpi_utils/pyTools/build/
mpi_utils/pyTools/dist/
cesm_utils/dist/
conform/dist/
diag_utils/dist/
diagnostics/dist/
timeseries/dist/
ocean_remap/dist/

# Ignore cesm-env2
cesm-env2/
@@ -21,9 +32,10 @@ cesm-env2/
*.mod
*.so

# Ignore zonal average binary and link
# Ignore zonal average binary, makefile and link
ocn_diag/tool_lib/za
ocn_diag/tool_lib/zon_avg/za
ocn_diag/tool_lib/zon_avg/makefile

# ignore any .svn files
.svn*
72 changes: 72 additions & 0 deletions Config/config_conform.xml
View file
Original file line number Diff line number Diff line change
@@ -0,0 +1,72 @@
<?xml version="1.0"?>

<config_definition version="1.0">

<!-- ======================================================================= -->
<!-- env_postprocess.xml -->
<!-- ======================================================================= -->

<groups>
<group name="conform_info">
<order>0</order>
<comment>Environment variable settings associated with the conform tool.</comment>

<entry id="CONFORM_GLOBAL_ATTRIBUTES"
type="string"
valid_values=""
value="/glade/p/cesm/conform-input/cmip6_input/CESM_CMIP6.ga"
group="conform_info"
desc="The full path file name to the global attributes files. This file contains the attributes that will be added to all files."
></entry>

<entry id="CONFORM_CESM_DEFINITIONS"
type="string"
valid_values=""
value="/glade/p/cesm/conform-input/cmip6_input/CESM_MastList.def"
group="conform_info"
desc="The full path file name to the CESM definitions file. This file contains the definitions to go from CESM raw output to the standardized variable name."
></entry>

<entry id="CONFORM_EXP_NAME"
type="string"
valid_values=""
value=""
group="conform_info"
desc="The CMIP experiment name to generate the needed input for."
></entry>

<entry id="CONFORM_JSON_DIRECTORY"
type="string"
valid_values=""
value="$PP_CASE_PATH"
group="conform_info"
desc="The directory to create the conform input files into."
></entry>

<entry id="CONFORM_OUTPUT_DIR"
type="string"
valid_values=""
value=""
group="conform_info"
desc="The base directory for the conform output."
></entry>

<entry id="CONFORM_EXTRA_FIELD_JSON"
type="string"
valid_values=""
value="/glade/p/cesm/conform-input/extra_field_input/extra_vars.json"
group="conform_info"
desc="JSON file which contains the variable information for extra fields to add."
></entry>

<entry id="CONFORM_EXTRA_FIELD_NETCDF_DIR"
type="string"
valid_values=""
value="/glade/p/cesm/conform-input/extra_field_input/"
group="conform_info"
desc="The base directory for extra conform input. This is usually reserved for netcdf files that contain grid information."
></entry>
</group>
</groups>
</config_definition>

63 changes: 52 additions & 11 deletions Config/config_postprocess.xml
View file
Original file line number Diff line number Diff line change
@@ -43,6 +43,14 @@
desc="post processing directory location on local machine where cesm-env2 python virtualenv is located."
></entry>

<entry id="POSTPROCESS_PATH_DAV"
type="string"
valid_values=""
value="inherit"
group="case_info"
desc="post processing directory location on local machine where DAV specific cesm-env2 python virtualenv is located."
></entry>

<entry id="DOUT_S_ROOT"
type="string"
valid_values=""
@@ -101,16 +109,24 @@

<entry id="CESM_TAG"
type="string"
valid_values="cesm2_0_beta05"
valid_values="cesm2_0"
value="inherit"
group="case_info"
desc="CESM tag used to create this case"
></entry>

<entry id="USER_NAME"
type="string"
valid_values=""
value="inherit"
group="case_info"
desc="User name of person running this set of diagnostics"
></entry>
</group>

<group name="postprocess">
<order>1</order>
<comment>Environment variable settings to control postprocessing tasks.</comment>
<comment>Environment variable settings to control postprocessing tasks. These variables are used by the cylc workflow manager and the copy_html utility.</comment>

<entry id="POSTPROCESS_VIRTUALENV"
type="string"
@@ -136,6 +152,14 @@
desc="If TRUE, create only complete chunks of variable timeseries data files as determined by the env_timeseries.xml tseries_filecat_tper and tseries_filecat_n elements. If FALSE, then incomplete chunks of variable timeseries data will be created and appended to upon subsequent running of the timeseries script. Default is TRUE."
></entry>

<entry id="TIMESERIES_GENERATE_ALL"
type="logical"
valid_values="TRUE,FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, create all variable timeseries files for all history streams regardless of the settings listed in the env_timeseries.xml tseries_create element. If set to FALSE, then use the tseries_create element setting in env_timeseries.xml for customized generation of timeseries files based on the history stream."
></entry>

<entry id="TIMESERIES_INPUT_ROOTDIR"
type="string"
valid_values="/glade/scratch/$USER/archive/$CASE, $DOUT_S_ROOT"
@@ -155,74 +179,91 @@
<entry id="GENERATE_AVGS_ATM"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the atm_averages script which launches the parallel python wrapper script atm_avg_generator.py to generate climatological files using the pyAverager tool. Settings for creating the averages are specified in the env_diags_atm.xml file."
></entry>

<entry id="GENERATE_DIAGS_ATM"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the atm_diagnostics script with launches the AMWG diagnostics package parallel python wrapper script atm_diags_generator.py to generate climatological plots associated with the run job output. See the AMWG diagnostics documentation for more details. Settings for creating the diagnostics are specified in the env_diags_atm.xml file."
></entry>

<entry id="GENERATE_AVGS_ICE"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the ice_averages script which launches the parallel python wrapper script ice_avg_generator.py to generate climatological files using the pyAverager tool. Settings for creating the averages are specified in the env_diags_ice.xml file."
></entry>

<entry id="GENERATE_DIAGS_ICE"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the ice_diagnostics script which launches the PCWG diagnostics package parallel python wrapper script ice_diags_generator.py to generate climatological plots associated with the run job output. See the PCWG diagnostics documentation for more details. Settings for creating the diagnostics are specified in the env_diags_ice.xml file."
></entry>

<entry id="GENERATE_AVGS_LND"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the lnd_averages script which launches the parallel python wrapper script lnd_avg_generator.py to generate climatological files using the pyAverager tool. Settings for creating the averages are specified in the env_diags_lnd.xml file."
></entry>

<entry id="GENERATE_REGRID_LND"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the lnd_regrid script which launches the parallel python wrapper script lnd_regrid_generator.py to regrid climatological files in parallel. Settings for creating the regridded files are specified in the env_diags_lnd.xml file."
></entry>

<entry id="GENERATE_DIAGS_LND"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the lnd_diagnostics script which launches the LMWG diagnostics package parallel python wrapper script lnd_diags_generator.py to generate climatological plots associated with the run job output. See the LMWG diagnostics documentation for more details. Settings for creating the diagnostics are specified in the env_diags_lnd.xml file."
></entry>

<entry id="GENERATE_AVGS_OCN"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the ocn_averages script which launches the parallel python wrapper script ocn_avg_generator.py to generate climatological files using the pyAverager tool. Settings for creating the averages are specified in the env_diags_ocn.xml file."
></entry>

<entry id="GENERATE_DIAGS_OCN"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the OMWG diagnostics package parallel python wrapper script to generate climatological plots associated with the run job output. See the OMWG diagnostics documentation for more details. Settings for creating the diagnostics are specified in the env_diags_ocn.xml file."
></entry>

<entry id="STANDARDIZE_TIMESERIES"
type="logical"
valid_values="TRUE,FALSE"
value="FALSE"
group="postprocess"
desc="If TRUE, standardize the data. This option will conform the data to CMIP experiment specifications."
></entry>

<entry id="GENERATE_ILAMB"
type="logical"
valid_values="TRUE,FALSE"
value="TRUE"
group="postprocess"
desc="If TRUE, this calls the ilamb script which launches the ILAMB diagnostics package parallel python wrapper script ilamb-run. Settings for creating the diagnostics are specified in the env_ilamb.xml file."
></entry>

</group>

<group name="web_options">
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