Explore the cancer relevance of your gene list

Molecular Signatures Database (MSigDB) in a data frame

Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighbors as well as shortest paths between two entities. Additionally, the API can be extended to add other functions such as enrichment analysis, and specialized queries.

Ready-to-use curated genesets for cinaR

Collection of classes to store gene sets.

Knowledge base for Orange3-bioinformatics add-on

An R package containing multiple data sets for bioinformatics analysis

GSEA plugin for PathVisio

GeneSetCart is an interactive web-based platform that enables investigators to gather gene sets from various sources; augment these sets with gene-gene co-expression correlations and protein-protein interactions; perform set operations on these sets such as union, consensus, and intersection; and visualize and analyze these gene sets.

As part of the DRPPM-PATH-SURVEIOR family, this R Shiny app aims to identify clusters of pathways based on Jaccard Distance