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Modified the overall smoothing parameters for (sc)ATAC-seq compartments from k=5 to k=2 (corresponds to 5 bin smoothing)
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Modifed which singular vector was returned from the right (PC-1) to the left
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The right singular vector is now being used to return QC information regarding the compartments
- compartmap is accepted and added to the 3.8 release of Bioconductor!
- Initial addition of functions and tests