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-[[package]] -name = "zune-core" -version = "0.5.1" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "cb8a0807f7c01457d0379ba880ba6322660448ddebc890ce29bb64da71fb40f9" - -[[package]] -name = "zune-inflate" -version = "0.2.54" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "73ab332fe2f6680068f3582b16a24f90ad7096d5d39b974d1c0aff0125116f02" -dependencies = [ - "simd-adler32", -] - -[[package]] -name = "zune-jpeg" -version = "0.4.21" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "29ce2c8a9384ad323cf564b67da86e21d3cfdff87908bc1223ed5c99bc792713" -dependencies = [ - "zune-core 0.4.12", -] - -[[package]] -name = "zune-jpeg" -version = "0.5.12" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "410e9ecef634c709e3831c2cfdb8d9c32164fae1c67496d5b68fff728eec37fe" -dependencies = [ - "zune-core 0.5.1", -] diff --git a/crates/fd5/Cargo.toml b/crates/fd5/Cargo.toml index 40c1e79..a4177f1 100644 --- a/crates/fd5/Cargo.toml +++ b/crates/fd5/Cargo.toml @@ -12,6 +12,7 @@ sha2 = { workspace = true } serde = { workspace = true } serde_json = { workspace = true } thiserror = "2" +toml = "0.8" [dev-dependencies] tempfile = "3" diff --git a/crates/fd5/src/audit.rs b/crates/fd5/src/audit.rs new file mode 100644 index 0000000..8aa76e7 --- /dev/null +++ b/crates/fd5/src/audit.rs @@ -0,0 +1,217 @@ +//! Audit trail for fd5 files. +//! +//! Stores a tamper-evident chain of `AuditEntry` records in the +//! `_fd5_audit_log` root attribute (JSON array). Because this attribute +//! is NOT in `EXCLUDED_ATTRS`, it participates in the Merkle tree and +//! any modification is detected by `verify`. + +use serde::{Deserialize, Serialize}; + +use hdf5_metno::types::VarLenUnicode; +use hdf5_metno::File; + +use crate::error::{Fd5Error, Fd5Result}; + +/// The HDF5 attribute name where the audit log lives. +pub const AUDIT_LOG_ATTR: &str = "_fd5_audit_log"; + +/// Identity of the person or system that performed a change. +#[derive(Debug, Clone, Serialize, Deserialize, PartialEq)] +pub struct Author { + #[serde(rename = "type")] + pub author_type: String, + pub id: String, + pub name: String, +} + +/// A single change within an audit entry. +#[derive(Debug, Clone, Serialize, Deserialize, PartialEq)] +pub struct Change { + pub action: String, + pub path: String, + pub attr: String, + #[serde(skip_serializing_if = "Option::is_none")] + pub old: Option, + #[serde(skip_serializing_if = "Option::is_none")] + pub new: Option, +} + +/// One entry in the audit chain. +#[derive(Debug, Clone, Serialize, Deserialize, PartialEq)] +pub struct AuditEntry { + pub parent_hash: String, + pub timestamp: String, + pub author: Author, + pub message: String, + pub changes: Vec, +} + +/// Read the audit log from an fd5 file. +/// +/// Returns an empty `Vec` if the `_fd5_audit_log` attribute does not exist. +pub fn read_audit_log(file: &File) -> Fd5Result> { + let root = file.as_group()?; + let attr = match root.attr(AUDIT_LOG_ATTR) { + Ok(a) => a, + Err(_) => return Ok(Vec::new()), + }; + + let raw: String = attr + .read_scalar::() + .map(|v| v.as_str().to_string()) + .map_err(|e| Fd5Error::Other(format!("Failed to read {AUDIT_LOG_ATTR}: {e}")))?; + + let entries: Vec = serde_json::from_str(&raw)?; + Ok(entries) +} + +/// Append an audit entry to the log, preserving existing entries. +pub fn append_audit_entry(file: &File, entry: &AuditEntry) -> Fd5Result<()> { + let root = file.as_group()?; + + // Read existing entries (or start with empty vec) + let mut entries = read_audit_log(file)?; + entries.push(entry.clone()); + + let json = serde_json::to_string(&entries)?; + let vlu: VarLenUnicode = json + .parse() + .map_err(|_| Fd5Error::Other("audit JSON contains null bytes".to_string()))?; + + // Delete old attribute if present, then write new + if root.attr(AUDIT_LOG_ATTR).is_ok() { + root.delete_attr(AUDIT_LOG_ATTR)?; + } + root.new_attr::() + .shape(()) + .create(AUDIT_LOG_ATTR)? + .write_scalar(&vlu)?; + + file.flush()?; + Ok(()) +} + +#[cfg(test)] +mod tests { + use super::*; + use tempfile::NamedTempFile; + + /// Helper: create a minimal HDF5 file with a content_hash attribute. + fn make_test_file() -> (NamedTempFile, File) { + let tmp = NamedTempFile::new().expect("create temp file"); + let path = tmp.path(); + let file = File::create(path).expect("create HDF5 file"); + let root = file.as_group().unwrap(); + + // Write a content_hash attribute so it behaves like an fd5 file + let vlu: VarLenUnicode = "sha256:0000000000000000000000000000000000000000000000000000000000000000" + .parse() + .unwrap(); + root.new_attr::() + .shape(()) + .create("content_hash") + .unwrap() + .write_scalar(&vlu) + .unwrap(); + + file.flush().unwrap(); + (tmp, file) + } + + fn sample_author() -> Author { + Author { + author_type: "orcid".to_string(), + id: "0000-0001-2345-6789".to_string(), + name: "Test User".to_string(), + } + } + + fn sample_entry(parent_hash: &str) -> AuditEntry { + AuditEntry { + parent_hash: parent_hash.to_string(), + timestamp: "2026-03-02T14:30:00Z".to_string(), + author: sample_author(), + message: "Updated calibration factor".to_string(), + changes: vec![Change { + action: "edit".to_string(), + path: "/group".to_string(), + attr: "calibration".to_string(), + old: Some("1.0".to_string()), + new: Some("1.05".to_string()), + }], + } + } + + #[test] + fn test_audit_entry_serde() { + let entry = sample_entry("sha256:abc123"); + let json = serde_json::to_string(&entry).expect("serialize"); + let roundtrip: AuditEntry = serde_json::from_str(&json).expect("deserialize"); + assert_eq!(entry, roundtrip); + + // Verify JSON field names match Python format + let val: serde_json::Value = serde_json::from_str(&json).unwrap(); + assert!(val.get("parent_hash").is_some()); + assert!(val.get("timestamp").is_some()); + assert!(val.get("author").is_some()); + assert!(val.get("message").is_some()); + assert!(val.get("changes").is_some()); + + // Author must use "type" not "author_type" in JSON + let author_val = val.get("author").unwrap(); + assert!(author_val.get("type").is_some()); + assert!(author_val.get("author_type").is_none()); + } + + #[test] + fn test_read_empty_log() { + let (_tmp, file) = make_test_file(); + let log = read_audit_log(&file).expect("read_audit_log should succeed"); + assert!(log.is_empty(), "empty file should have no audit entries"); + } + + #[test] + fn test_write_read_roundtrip() { + let (_tmp, file) = make_test_file(); + let entry = sample_entry("sha256:abc123"); + + append_audit_entry(&file, &entry).expect("append should succeed"); + let log = read_audit_log(&file).expect("read should succeed"); + + assert_eq!(log.len(), 1); + assert_eq!(log[0], entry); + } + + #[test] + fn test_append_preserves_existing() { + let (_tmp, file) = make_test_file(); + let entry1 = sample_entry("sha256:first"); + let entry2 = sample_entry("sha256:second"); + + append_audit_entry(&file, &entry1).expect("first append"); + append_audit_entry(&file, &entry2).expect("second append"); + + let log = read_audit_log(&file).expect("read"); + assert_eq!(log.len(), 2); + assert_eq!(log[0], entry1); + assert_eq!(log[1], entry2); + } + + #[test] + fn test_malformed_json_error() { + let (_tmp, file) = make_test_file(); + let root = file.as_group().unwrap(); + + // Write malformed JSON directly + let bad_json: VarLenUnicode = "not valid json [[[".parse().unwrap(); + root.new_attr::() + .shape(()) + .create(AUDIT_LOG_ATTR) + .unwrap() + .write_scalar(&bad_json) + .unwrap(); + + let result = read_audit_log(&file); + assert!(result.is_err(), "malformed JSON should produce an error"); + } +} diff --git a/crates/fd5/src/edit.rs b/crates/fd5/src/edit.rs index 289301c..673bad7 100644 --- a/crates/fd5/src/edit.rs +++ b/crates/fd5/src/edit.rs @@ -8,9 +8,42 @@ use std::path::{Path, PathBuf}; use hdf5_metno::types::VarLenUnicode; use hdf5_metno::File; +use crate::audit::{self, AuditEntry, Author, Change}; use crate::error::Fd5Result; use crate::hash::compute_content_hash; +/// Return the current UTC time as an ISO 8601 string. +/// +/// Uses only `std::time` to avoid adding chrono as a dependency. +fn now_utc() -> String { + use std::time::{SystemTime, UNIX_EPOCH}; + let secs = SystemTime::now() + .duration_since(UNIX_EPOCH) + .unwrap_or_default() + .as_secs(); + + // Convert epoch seconds to date/time components + let days = secs / 86400; + let time_of_day = secs % 86400; + let hours = time_of_day / 3600; + let minutes = (time_of_day % 3600) / 60; + let seconds = time_of_day % 60; + + // Civil date from days since epoch (algorithm from Howard Hinnant) + let z = days as i64 + 719468; + let era = if z >= 0 { z } else { z - 146096 } / 146097; + let doe = (z - era * 146097) as u64; + let yoe = (doe - doe / 1460 + doe / 36524 - doe / 146096) / 365; + let y = yoe as i64 + era * 400; + let doy = doe - (365 * yoe + yoe / 4 - yoe / 100); + let mp = (5 * doy + 2) / 153; + let d = doy - (153 * mp + 2) / 5 + 1; + let m = if mp < 10 { mp + 3 } else { mp - 9 }; + let y = if m <= 2 { y + 1 } else { y }; + + format!("{:04}-{:02}-{:02}T{:02}:{:02}:{:02}Z", y, m, d, hours, minutes, seconds) +} + /// How the edit should be applied. #[derive(Debug, Clone, Copy, PartialEq)] pub enum EditMode { @@ -37,6 +70,10 @@ pub struct EditPlan { pub old_value: String, pub new_value: AttrValue, pub mode: EditMode, + /// Optional human-readable message explaining the edit. + pub message: Option, + /// Author identity for the audit trail. + pub author: Author, } /// Result of a completed edit. @@ -97,7 +134,30 @@ impl EditPlan { write_attr(&target_group, &self.attr_name, &self.new_value)?; } - // Recompute and write new content_hash + // Build the new-value string for the audit trail + let new_value_str = match &self.new_value { + AttrValue::String(s) => s.clone(), + AttrValue::Int64(v) => v.to_string(), + AttrValue::Float64(v) => v.to_string(), + }; + + // Create and append audit entry + let entry = AuditEntry { + parent_hash: old_hash.clone(), + timestamp: now_utc(), + author: self.author.clone(), + message: self.message.clone().unwrap_or_default(), + changes: vec![Change { + action: "edit".to_string(), + path: self.attr_path.clone(), + attr: self.attr_name.clone(), + old: Some(self.old_value.clone()), + new: Some(new_value_str), + }], + }; + audit::append_audit_entry(&file, &entry)?; + + // Recompute and write new content_hash (now covers audit log too) let new_hash = compute_content_hash(&file)?; // Delete old content_hash and write new if root_group.attr("content_hash").is_ok() { @@ -148,3 +208,190 @@ fn write_attr( } Ok(()) } + +#[cfg(test)] +mod tests { + use super::*; + use crate::audit::AUDIT_LOG_ATTR; + use tempfile::TempDir; + + /// Helper: create a minimal fd5 file with a content_hash and a string attribute. + fn make_editable_file(dir: &TempDir) -> PathBuf { + let path = dir.path().join("test.fd5"); + let file = File::create(&path).expect("create HDF5 file"); + let root = file.as_group().unwrap(); + + // Write a string attribute that we'll edit + let vlu: VarLenUnicode = "1.0".parse().unwrap(); + root.new_attr::() + .shape(()) + .create("calibration") + .unwrap() + .write_scalar(&vlu) + .unwrap(); + + // Compute and write content_hash + let hash = compute_content_hash(&file).unwrap(); + let hash_vlu: VarLenUnicode = hash.parse().unwrap(); + root.new_attr::() + .shape(()) + .create("content_hash") + .unwrap() + .write_scalar(&hash_vlu) + .unwrap(); + + file.flush().unwrap(); + drop(file); + path + } + + fn test_author() -> Author { + Author { + author_type: "orcid".to_string(), + id: "0000-0001-2345-6789".to_string(), + name: "Test User".to_string(), + } + } + + #[test] + fn test_edit_creates_audit_entry() { + let dir = TempDir::new().unwrap(); + let path = make_editable_file(&dir); + + let plan = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "1.0".to_string(), + new_value: AttrValue::String("1.05".to_string()), + mode: EditMode::InPlace, + message: Some("Updated calibration factor".to_string()), + author: test_author(), + }; + + let result = plan.apply().expect("edit should succeed"); + + // Verify audit log was created + let file = File::open(&result.output_path).unwrap(); + let log = audit::read_audit_log(&file).expect("read audit log"); + assert_eq!(log.len(), 1); + assert_eq!(log[0].message, "Updated calibration factor"); + assert_eq!(log[0].changes.len(), 1); + assert_eq!(log[0].changes[0].action, "edit"); + assert_eq!(log[0].changes[0].old, Some("1.0".to_string())); + assert_eq!(log[0].changes[0].new, Some("1.05".to_string())); + } + + #[test] + fn test_edit_preserves_existing_log() { + let dir = TempDir::new().unwrap(); + let path = make_editable_file(&dir); + + // First edit + let plan1 = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "1.0".to_string(), + new_value: AttrValue::String("1.05".to_string()), + mode: EditMode::InPlace, + message: Some("First edit".to_string()), + author: test_author(), + }; + plan1.apply().expect("first edit"); + + // Second edit + let plan2 = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "1.05".to_string(), + new_value: AttrValue::String("1.1".to_string()), + mode: EditMode::InPlace, + message: Some("Second edit".to_string()), + author: test_author(), + }; + plan2.apply().expect("second edit"); + + let file = File::open(&path).unwrap(); + let log = audit::read_audit_log(&file).expect("read"); + assert_eq!(log.len(), 2); + assert_eq!(log[0].message, "First edit"); + assert_eq!(log[1].message, "Second edit"); + } + + #[test] + fn test_audit_entry_has_correct_parent_hash() { + let dir = TempDir::new().unwrap(); + let path = make_editable_file(&dir); + + // Read the original content_hash + let original_hash = { + let file = File::open(&path).unwrap(); + let root = file.as_group().unwrap(); + let attr = root.attr("content_hash").unwrap(); + attr.read_scalar::() + .unwrap() + .as_str() + .to_string() + }; + + let plan = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "1.0".to_string(), + new_value: AttrValue::String("1.05".to_string()), + mode: EditMode::InPlace, + message: Some("test".to_string()), + author: test_author(), + }; + plan.apply().expect("edit"); + + let file = File::open(&path).unwrap(); + let log = audit::read_audit_log(&file).expect("read"); + assert_eq!(log[0].parent_hash, original_hash); + } + + #[test] + fn test_content_hash_covers_audit_log() { + let dir = TempDir::new().unwrap(); + let path = make_editable_file(&dir); + + let plan = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "1.0".to_string(), + new_value: AttrValue::String("1.05".to_string()), + mode: EditMode::InPlace, + message: Some("test".to_string()), + author: test_author(), + }; + let result = plan.apply().expect("edit"); + + // Tamper with the audit log + { + let file = File::open_rw(&result.output_path).unwrap(); + let root = file.as_group().unwrap(); + if root.attr(AUDIT_LOG_ATTR).is_ok() { + root.delete_attr(AUDIT_LOG_ATTR).unwrap(); + } + let tampered: VarLenUnicode = "[]".parse().unwrap(); + root.new_attr::() + .shape(()) + .create(AUDIT_LOG_ATTR) + .unwrap() + .write_scalar(&tampered) + .unwrap(); + file.flush().unwrap(); + } + + // Verify should now fail + let status = crate::verify::verify(&result.output_path).expect("verify call"); + match status { + crate::verify::Fd5Status::Invalid { .. } => {} // expected + other => panic!("expected Invalid after tampering, got {:?}", other), + } + } +} diff --git a/crates/fd5/src/identity.rs b/crates/fd5/src/identity.rs new file mode 100644 index 0000000..9fb5496 --- /dev/null +++ b/crates/fd5/src/identity.rs @@ -0,0 +1,126 @@ +//! User identity for audit trail authorship. +//! +//! Loads identity from `~/.fd5/identity.toml` and converts to [`Author`] +//! for audit entries. + +use std::path::Path; + +use serde::{Deserialize, Serialize}; + +use crate::audit::Author; +use crate::error::Fd5Result; + +/// User identity for signing audit entries. +#[derive(Debug, Clone, Serialize, Deserialize, PartialEq)] +pub struct Identity { + #[serde(rename = "type")] + pub identity_type: String, + pub id: String, + pub name: String, +} + +impl Identity { + /// Create an anonymous identity (default when no config exists). + pub fn anonymous() -> Self { + Self { + identity_type: "anonymous".to_string(), + id: String::new(), + name: "Anonymous".to_string(), + } + } + + /// Load identity from the default location (`~/.fd5/identity.toml`). + pub fn load() -> Fd5Result { + let home = std::env::var("HOME") + .or_else(|_| std::env::var("USERPROFILE")) + .unwrap_or_else(|_| ".".to_string()); + let path = Path::new(&home).join(".fd5").join("identity.toml"); + Self::load_from(&path) + } + + /// Load identity from a specific TOML file. + /// + /// Returns [`Identity::anonymous()`] if the file does not exist. + pub fn load_from(path: &Path) -> Fd5Result { + if !path.exists() { + return Ok(Self::anonymous()); + } + let content = std::fs::read_to_string(path)?; + let identity: Identity = toml::from_str(&content) + .map_err(|e| crate::error::Fd5Error::Other(format!("Invalid identity TOML: {e}")))?; + Ok(identity) + } + + /// Save identity to a specific TOML file. + pub fn save_to(&self, path: &Path) -> Fd5Result<()> { + if let Some(parent) = path.parent() { + std::fs::create_dir_all(parent)?; + } + let content = toml::to_string_pretty(self) + .map_err(|e| crate::error::Fd5Error::Other(format!("Failed to serialize identity: {e}")))?; + std::fs::write(path, content)?; + Ok(()) + } + + /// Convert to an [`Author`] for use in audit entries. + pub fn to_author(&self) -> Author { + Author { + author_type: self.identity_type.clone(), + id: self.id.clone(), + name: self.name.clone(), + } + } +} + +#[cfg(test)] +mod tests { + use super::*; + use tempfile::TempDir; + + #[test] + fn test_anonymous_default() { + let id = Identity::anonymous(); + assert_eq!(id.identity_type, "anonymous"); + assert_eq!(id.id, ""); + assert_eq!(id.name, "Anonymous"); + } + + #[test] + fn test_save_load_roundtrip() { + let dir = TempDir::new().expect("tempdir"); + let path = dir.path().join("identity.toml"); + + let id = Identity { + identity_type: "orcid".to_string(), + id: "0000-0001-2345-6789".to_string(), + name: "Lars Gerchow".to_string(), + }; + + id.save_to(&path).expect("save"); + let loaded = Identity::load_from(&path).expect("load"); + assert_eq!(id, loaded); + } + + #[test] + fn test_missing_file_returns_anonymous() { + let dir = TempDir::new().expect("tempdir"); + let path = dir.path().join("nonexistent.toml"); + + let id = Identity::load_from(&path).expect("should not error"); + assert_eq!(id.identity_type, "anonymous"); + } + + #[test] + fn test_to_author_conversion() { + let id = Identity { + identity_type: "orcid".to_string(), + id: "0000-0001-2345-6789".to_string(), + name: "Lars Gerchow".to_string(), + }; + + let author = id.to_author(); + assert_eq!(author.author_type, "orcid"); + assert_eq!(author.id, "0000-0001-2345-6789"); + assert_eq!(author.name, "Lars Gerchow"); + } +} diff --git a/crates/fd5/src/lib.rs b/crates/fd5/src/lib.rs index 17fab23..ae769c3 100644 --- a/crates/fd5/src/lib.rs +++ b/crates/fd5/src/lib.rs @@ -4,12 +4,16 @@ //! for immutable HDF5 data products sealed with `content_hash`. pub mod attr_ser; +pub mod audit; pub mod edit; pub mod error; pub mod hash; +pub mod identity; pub mod schema; pub mod verify; +pub use audit::{AuditEntry, Author, Change}; pub use error::{Fd5Error, Fd5Result}; pub use hash::{compute_content_hash, compute_id}; -pub use verify::{Fd5Status, verify}; +pub use identity::Identity; +pub use verify::{ChainStatus, Fd5Status, verify, verify_chain}; diff --git a/crates/fd5/src/verify.rs b/crates/fd5/src/verify.rs index 80e1424..8887ad9 100644 --- a/crates/fd5/src/verify.rs +++ b/crates/fd5/src/verify.rs @@ -6,6 +6,7 @@ use std::path::Path; use hdf5_metno::File; +use crate::audit; use crate::error::{Fd5Error, Fd5Result}; use crate::hash::compute_content_hash; @@ -64,3 +65,320 @@ pub fn verify_file(file: &File) -> Fd5Result { Ok(Fd5Status::Invalid { stored, computed }) } } + +/// Status of audit chain verification. +#[derive(Debug, Clone)] +pub enum ChainStatus { + /// All entries form a valid chain. Contains the number of entries. + Valid(usize), + /// No audit log found on the file. + NoLog, + /// Chain is broken at the given index. + BrokenChain { + index: usize, + expected: String, + actual: String, + }, + /// Error reading or parsing the audit log. + Error(String), +} + +/// Helper: write a VarLenUnicode attribute, deleting any existing one first. +fn write_vlu_attr( + root: &hdf5_metno::Group, + path: &str, + attr_name: &str, + vlu: &hdf5_metno::types::VarLenUnicode, +) -> Fd5Result<()> { + if path == "/" { + // Delete and recreate on root + let _ = root.delete_attr(attr_name); + root.new_attr::() + .shape(()) + .create(attr_name)? + .write_scalar(vlu)?; + } else { + let group = root.group(path) + .map_err(|e| Fd5Error::Other(format!( + "Cannot open group '{}': {e}", path + )))?; + let _ = group.delete_attr(attr_name); + group + .new_attr::() + .shape(()) + .create(attr_name)? + .write_scalar(vlu)?; + } + Ok(()) +} + +/// Verify the audit chain integrity. +/// +/// Reconstructs each intermediate file state by reversing attribute edits +/// recorded in the audit entries, then checks that each entry's +/// `parent_hash` matches the Merkle hash of the reconstructed state. +/// +/// This works by copying the file to a temporary location and +/// iteratively undoing changes to verify each link in the chain. +pub fn verify_chain(file: &File) -> Fd5Result { + let entries = match audit::read_audit_log(file) { + Ok(entries) if entries.is_empty() => return Ok(ChainStatus::NoLog), + Ok(entries) => entries, + Err(e) => return Ok(ChainStatus::Error(format!("{e}"))), + }; + + // We need a writable copy to reconstruct intermediate states. + let src_path = file.filename(); + // Use a unique counter to avoid collisions between parallel calls. + use std::sync::atomic::{AtomicU64, Ordering}; + static COUNTER: AtomicU64 = AtomicU64::new(0); + let unique = COUNTER.fetch_add(1, Ordering::Relaxed); + let tmp_path = std::env::temp_dir().join(format!( + "fd5_chain_verify_{}_{}.fd5", + std::process::id(), + unique, + )); + std::fs::copy(&src_path, &tmp_path)?; + + let tmp_file = File::open_rw(&tmp_path)?; + let root = tmp_file.as_group()?; + + // Verify from the last entry backwards to the first. + // At each step, we undo the entry's changes and check the parent_hash. + // We iterate in reverse: verify entry[n-1] first (current state minus + // entry[n-1]'s changes), then entry[n-2], etc. + for i in (0..entries.len()).rev() { + let entry = &entries[i]; + + // Undo this entry's attribute changes + for change in &entry.changes { + if let Some(ref old_val) = change.old { + let attr_name = change.attr.as_str(); + let vlu: hdf5_metno::types::VarLenUnicode = old_val + .parse() + .map_err(|_| Fd5Error::Other("null byte in attr value".to_string()))?; + + write_vlu_attr(&root, &change.path, attr_name, &vlu)?; + } + } + + // Set audit log to entries[0..i] (before this entry was appended) + let prefix = &entries[..i]; + if root.attr(audit::AUDIT_LOG_ATTR).is_ok() { + root.delete_attr(audit::AUDIT_LOG_ATTR)?; + } + if !prefix.is_empty() { + let json = serde_json::to_string(prefix)?; + let vlu: hdf5_metno::types::VarLenUnicode = json + .parse() + .map_err(|_| Fd5Error::Other("null byte in JSON".to_string()))?; + root.new_attr::() + .shape(()) + .create(audit::AUDIT_LOG_ATTR)? + .write_scalar(&vlu)?; + } + + // Remove content_hash (it's excluded from Merkle but let's be clean) + if root.attr("content_hash").is_ok() { + root.delete_attr("content_hash")?; + } + + tmp_file.flush()?; + let computed = compute_content_hash(&tmp_file)?; + + if computed != entry.parent_hash { + drop(tmp_file); + let _ = std::fs::remove_file(&tmp_path); + return Ok(ChainStatus::BrokenChain { + index: i, + expected: computed, + actual: entry.parent_hash.clone(), + }); + } + } + + drop(tmp_file); + let _ = std::fs::remove_file(&tmp_path); + + Ok(ChainStatus::Valid(entries.len())) +} + +#[cfg(test)] +mod tests { + use super::*; + use crate::audit::{AuditEntry, Author, Change}; + use crate::edit::{AttrValue, EditMode, EditPlan}; + use hdf5_metno::types::VarLenUnicode; + use tempfile::TempDir; + + /// Helper: create a minimal fd5 file with content_hash and a string attr. + fn make_test_file(dir: &TempDir) -> std::path::PathBuf { + let path = dir.path().join("chain_test.fd5"); + let file = File::create(&path).expect("create file"); + let root = file.as_group().unwrap(); + + let vlu: VarLenUnicode = "hello".parse().unwrap(); + root.new_attr::() + .shape(()) + .create("calibration") + .unwrap() + .write_scalar(&vlu) + .unwrap(); + + let hash = crate::hash::compute_content_hash(&file).unwrap(); + let hash_vlu: VarLenUnicode = hash.parse().unwrap(); + root.new_attr::() + .shape(()) + .create("content_hash") + .unwrap() + .write_scalar(&hash_vlu) + .unwrap(); + + file.flush().unwrap(); + drop(file); + path + } + + fn test_author() -> Author { + Author { + author_type: "orcid".to_string(), + id: "0000-0001-2345-6789".to_string(), + name: "Test User".to_string(), + } + } + + #[test] + fn test_no_log_returns_nolog() { + let dir = TempDir::new().unwrap(); + let path = make_test_file(&dir); + let file = File::open(&path).unwrap(); + let status = verify_chain(&file).expect("verify_chain"); + match status { + ChainStatus::NoLog => {} // expected + other => panic!("expected NoLog, got {:?}", other), + } + } + + #[test] + fn test_single_entry_valid() { + let dir = TempDir::new().unwrap(); + let path = make_test_file(&dir); + + let plan = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "hello".to_string(), + new_value: AttrValue::String("world".to_string()), + mode: EditMode::InPlace, + message: Some("single edit".to_string()), + author: test_author(), + }; + plan.apply().expect("edit"); + + let file = File::open(&path).unwrap(); + let status = verify_chain(&file).expect("verify_chain"); + match status { + ChainStatus::Valid(n) => assert_eq!(n, 1), + other => panic!("expected Valid(1), got {:?}", other), + } + } + + #[test] + fn test_valid_chain() { + let dir = TempDir::new().unwrap(); + let path = make_test_file(&dir); + + // Two sequential edits + let plan1 = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "hello".to_string(), + new_value: AttrValue::String("world".to_string()), + mode: EditMode::InPlace, + message: Some("first".to_string()), + author: test_author(), + }; + plan1.apply().expect("edit1"); + + let plan2 = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "world".to_string(), + new_value: AttrValue::String("final".to_string()), + mode: EditMode::InPlace, + message: Some("second".to_string()), + author: test_author(), + }; + plan2.apply().expect("edit2"); + + let file = File::open(&path).unwrap(); + let status = verify_chain(&file).expect("verify_chain"); + match status { + ChainStatus::Valid(n) => assert_eq!(n, 2), + other => panic!("expected Valid(2), got {:?}", other), + } + } + + #[test] + fn test_broken_chain_detected() { + let dir = TempDir::new().unwrap(); + let path = make_test_file(&dir); + + // Make one real edit to create a valid audit entry + let plan = EditPlan { + source_path: path.clone(), + attr_path: "/".to_string(), + attr_name: "calibration".to_string(), + old_value: "hello".to_string(), + new_value: AttrValue::String("world".to_string()), + mode: EditMode::InPlace, + message: Some("legit edit".to_string()), + author: test_author(), + }; + plan.apply().expect("edit"); + + // Now manually append a fake entry with a wrong parent_hash + { + let file = File::open_rw(&path).unwrap(); + let fake_entry = AuditEntry { + parent_hash: "sha256:0000000000000000000000000000000000000000000000000000000000000000".to_string(), + timestamp: "2026-03-02T15:00:00Z".to_string(), + author: test_author(), + message: "fake entry".to_string(), + changes: vec![Change { + action: "edit".to_string(), + path: "/".to_string(), + attr: "calibration".to_string(), + old: Some("world".to_string()), + new: Some("tampered".to_string()), + }], + }; + crate::audit::append_audit_entry(&file, &fake_entry).expect("append"); + + // Re-seal so Merkle verify passes but chain is broken + let root = file.as_group().unwrap(); + if root.attr("content_hash").is_ok() { + root.delete_attr("content_hash").unwrap(); + } + let new_hash = crate::hash::compute_content_hash(&file).unwrap(); + let vlu: VarLenUnicode = new_hash.parse().unwrap(); + root.new_attr::() + .shape(()) + .create("content_hash") + .unwrap() + .write_scalar(&vlu) + .unwrap(); + file.flush().unwrap(); + } + + let file = File::open(&path).unwrap(); + let status = verify_chain(&file).expect("verify_chain"); + match status { + ChainStatus::BrokenChain { index, .. } => assert_eq!(index, 1), + other => panic!("expected BrokenChain at index 1, got {:?}", other), + } + } +} diff --git a/h5v/Cargo.toml b/h5v/Cargo.toml new file mode 100644 index 0000000..3848a02 --- /dev/null +++ b/h5v/Cargo.toml @@ -0,0 +1,4 @@ +[package] +name = "h5v" +version = "0.1.0" +edition = "2021" diff --git a/h5v/src/main.rs b/h5v/src/main.rs new file mode 100644 index 0000000..2afde2d --- /dev/null +++ b/h5v/src/main.rs @@ -0,0 +1,3 @@ +fn main() { + println!("h5v placeholder"); +}