File tree Expand file tree Collapse file tree 1 file changed +4
-4
lines changed
Expand file tree Collapse file tree 1 file changed +4
-4
lines changed Original file line number Diff line number Diff line change 11FROM debian:buster as prep
22WORKDIR /build
33RUN apt-get update && apt-get install -y make gcc zlib1g-dev wget unzip
4- RUN wget https://zlib.net/pigz/pigz-2.7 .tar.gz && \
5- tar -xzvf pigz-2.7 .tar.gz && \
6- cd pigz-2.7 && \
4+ RUN wget https://zlib.net/pigz/pigz-2.8 .tar.gz && \
5+ tar -xzvf pigz-2.8 .tar.gz && \
6+ cd pigz-2.8 && \
77 make
88RUN wget https://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.9.zip && \
99 unzip fastqc_v0.11.9.zip
@@ -16,7 +16,7 @@ FROM python:3.10-buster as base
1616WORKDIR /app
1717COPY --from=prep /build/bowtie2/* /usr/local/bin/
1818COPY --from=prep /build/FastQC /opt/fastqc
19- COPY --from=prep /build/pigz-2.7 /pigz /usr/local/bin/pigz
19+ COPY --from=prep /build/pigz-2.8 /pigz /usr/local/bin/pigz
2020RUN chmod ugo+x /opt/fastqc/fastqc && \
2121 ln -fs /opt/fastqc/fastqc /usr/local/bin/fastqc && \
2222 for file in `ls /opt/hmmer/bin`; do ln -fs /opt/hmmer/bin/${file} /usr/local/bin/${file}; done
You can’t perform that action at this time.
0 commit comments