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zhangrengang
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test macos-latest15:biopython4; fix bug
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.github/workflows/main-mac.yml

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@@ -41,8 +41,8 @@ jobs:
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conda env list
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export PATH=/Users/runner/miniconda3/envs/OrthoIndex/bin:$PATH
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which python
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ls -al /Users/runner/miniconda/envs/OrthoIndex/
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ls -al /Users/runner/miniconda/envs/OrthoIndex/bin
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ls -al /Users/runner/miniconda3/envs/OrthoIndex/
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ls -al /Users/runner/miniconda3/envs/OrthoIndex/bin
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conda init
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cat ~/.bashrc
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echo "==="

soi/dot_plotter.py

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@@ -230,7 +230,6 @@ def main(args):
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ks = None if kaks is None and args.ofdir is None else True
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#plot all
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plot_blocks(blocks, outplots, ks = ks,
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max_ks=args.max_ks, ks_hist=args.ks_hist, ks_cmap=args.ks_cmap,
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xlabels=chrs1, ylabels=chrs2, same_sp=same_sp,
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xpositions=xpositions, ypositions=ypositions,
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xelines=lines1, yelines=lines2, # chromosome ends

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